biogears Namespace Reference

Classes
class	AmountPerMassUnit
class	AmountPerTimeUnit
class	AmountPerVolumeUnit
class	AmountUnit
class	AnesthesiaMachine
	Generic anesthesia machine for positive pressure ventilation. More...
class	AreaPerTimePressureUnit
class	AreaUnit
class	BioGears
	Manages and controls execution of all data/systems in BioGears. More...
class	BioGearsCircuits
	Manages all circuits associated with all BioGears systems/equipement. More...
class	BioGearsCompartments
	Manages all compartments and graphs associated with all BioGears systems/equipement. More...
class	BioGearsConfiguration
	BioGears specific configuration parameters for all systems/equipment More...
class	BioGearsEngine
	This is the implementation of the PhysiologyEngine interface for the biogears engines. More...
class	BioGearsEngineTest
class	BioGearsScenario
	A BioGears specific scenario (i.e. holds a BioGears configuration object) More...
class	BioGearsScenarioExec
	Overloaded scenario exector to run a BioGears specific scenario. More...
class	BioGearsScenarioInitialParameters
	Overloaded scenario that creates a BioGears configuration as its configuration object. More...
class	BioGearsSubstances
	Manages and initializes all systems with substances needed by BioGears. More...
class	BioGearsSystem
	Generic class for handling the BioGears stabilization methodology. More...
class	BloodChemistry
class	Cardiovascular
	The Cardiovascular system utilizes circuit methodology to characterize the intravascular fluid dynamics throughout the body. More...
class	CCompoundUnit
class	CCompoundUnitElement
struct	CommonDataModelException
class	CommonDataModelTest
class	ConfigParser
class	ConfigSet
class	CPrefixDescriptor
class	CPScalar
class	CQuantityConversionDescriptor
class	CQuantityConversionKey
class	CQuantityTypeDescriptor
class	CUnitConversionEngine
class	CUnitDescriptor
class	CUnitDimension
class	CUnitStringLexer
class	DataPeak
class	DataTrack
class	DiffusionCalculator
class	Drugs
	The drug system contains the physiologically based pharmacokinetic (PBPK) model and the pharmacodynamic (PD) model. More...
class	ECG
	Generic ECG machine to assess the heart rhythm. More...
struct	EigenCircuitSolver
class	ElectricCapacitanceUnit
class	ElectricChargeUnit
class	ElectricCurrentUnit
class	ElectricInductanceUnit
class	ElectricPotentialUnit
class	ElectricResistanceUnit
class	Endocrine
class	Energy
class	EnergyPerAmountUnit
class	EnergyPerMassUnit
class	EnergyUnit
class	enum_hash
struct	enumStrings
class	Environment
	The Environment class characterizes the environment and manages interactions between the body its surroundings. More...
struct	error_functor
class	ErrorHandler
class	FlowComplianceUnit
class	FlowElastanceUnit
class	FlowInertanceUnit
class	FlowResistanceUnit
class	ForceUnit
class	FrequencyUnit
struct	Functor
class	Gastrointestinal
class	GeneralMath
class	HeatCapacitancePerAmountUnit
class	HeatCapacitancePerMassUnit
class	HeatCapacitanceUnit
class	HeatConductancePerAreaUnit
class	HeatConductanceUnit
class	HeatInductanceUnit
class	HeatResistanceAreaUnit
class	HeatResistanceUnit
class	Hepatic
class	HowToTracker
class	Inhaler
class	InitializeUnitConversionEngine
class	InversePressureUnit
class	InverseVolumeUnit
class	LengthPerTimePressureUnit
class	LengthPerTimeUnit
class	LengthUnit
class	Loggable
class	Logger
class	LoggerForward
class	MassPerAmountUnit
class	MassPerAreaTimeUnit
class	MassPerMassUnit
class	MassPerTimeUnit
class	MassPerVolumeUnit
class	MassUnit
class	Nervous
	The nervous class holds models of the peripheral and central nervous system. Currently, on the baroreceptor reflex is modeled. More...
class	NoUnit
class	NullLogger
class	OsmolalityUnit
class	OsmolarityUnit
class	PhysiologyEngine
class	PhysiologyEngineConfiguration
class	PhysiologyEngineDynamicStabilization
class	PhysiologyEngineDynamicStabilizationCriteria
class	PhysiologyEngineDynamicStabilizer
struct	PhysiologyEngineException
	Base exception class that all CDM classes throw when an error occurs. More...
class	PhysiologyEngineStabilization
class	PhysiologyEngineTimedStabilization
class	PhysiologyEngineTimedStabilizationCriteria
class	PhysiologyEngineTrack
class	PowerPerAreaTemperatureToTheFourthUnit
class	PowerUnit
class	PressurePerVolumeUnit
class	PressureTimePerAreaUnit
class	PressureTimePerVolumeAreaUnit
class	PressureUnit
class	PropertyConvergence
class	Renal
class	Respiratory
	The Respiratory System class handles the analysis and storage of data related the respiratory physiology and pathology. More...
class	RunEngineTask
class	RunningAverage
class	RunScenarioTask
class	SaturationCalculator
	The SaturationCalculator class holds the blood gas distribution model. More...
class	ScopedFileSystemLock
class	SEAction
class	SEActionManager
class	SEActiveCooling
class	SEActiveHeating
class	SEAcuteRespiratoryDistress
class	SEAcuteStress
class	SEAdvanceTime
class	SEAirwayObstruction
class	SEAnesthesiaMachine
class	SEAnesthesiaMachineAction
class	SEAnesthesiaMachineActionCollection
class	SEAnesthesiaMachineChamber
class	SEAnesthesiaMachineConfiguration
class	SEAnesthesiaMachineOxygenBottle
class	SEApnea
class	SEAppliedTemperature
class	SEAsthmaAttack
class	SEBloodChemistrySystem
class	SEBrainInjury
class	SEBreathHold
class	SEBronchoconstriction
class	SEBurnWound
class	SECardiacArrest
class	SECardiovascularSystem
class	SEChestCompression
class	SEChestCompressionForce
class	SEChestCompressionForceScale
class	SEChestOcclusiveDressing
class	SEChronicAnemia
class	SEChronicHeartFailure
class	SEChronicObstructivePulmonaryDisease
class	SEChronicPericardialEffusion
class	SEChronicRenalStenosis
class	SEChronicVentricularSystolicDysfunction
class	SECircuit
class	SECircuitCalculator
class	SECircuitLedger
class	SECircuitManager
class	SECircuitNode
class	SECircuitPath
class	SECombinedCircuit
class	SECompartment
class	SECompartmentDataRequest
class	SECompartmentGraph
class	SECompartmentLink
class	SECompartmentManager
class	SECompartmentNodes
class	SECompartmentSubstanceDataRequest
class	SECompartmentTransportGraph
class	SECompleteBloodCount
class	SEComprehensiveMetabolicPanel
class	SECondition
class	SEConditionManager
class	SEConsciousRespiration
class	SEConsciousRespirationCommand
class	SEConsumeNutrients
class	SEDataRequest
class	SEDataRequestManager
class	SEDataRequestScalar
class	SEDecimalFormat
class	SEDehydration
class	SEDiabetesType1
class	SEDiabetesType2
class	SEDrugSystem
class	SEDrugTransitState
class	SEElectricalCircuit
class	SEElectricalCircuitCalculator
class	SEElectricalCircuitNode
class	SEElectricalCircuitPath
class	SEElectroCardioGram
class	SEElectroCardioGramInterpolator
class	SEElectroCardioGramInterpolatorWaveform
class	SEEndocrineSystem
class	SEEnergySystem
class	SEEnvironment
class	SEEnvironmentAction
class	SEEnvironmentActionCollection
class	SEEnvironmentalConditions
class	SEEnvironmentChange
class	SEEnvironmentCondition
class	SEEnvironmentDataRequest
class	SEEquipmentDataRequest
class	SEEventHandler
class	SEExercise
class	SEExpiratoryValveLeak
class	SEExpiratoryValveObstruction
class	SEFluidCircuit
class	SEFluidCircuitCalculator
class	SEFluidCircuitNode
class	SEFluidCircuitPath
class	SEFluidCompartment
class	SEFluidCompartmentLink
class	SEForcedExhale
class	SEForcedInhale
class	SEFunction
class	SEFunctionElectricPotentialVsTime
class	SEFunctionVolumeVsTime
class	SEGasCompartment
class	SEGasCompartmentDataRequest
class	SEGasCompartmentGraph
class	SEGasCompartmentLink
class	SEGasSubstanceQuantity
class	SEGastrointestinalSystem
class	SEGenericScalar
	If you want to querry what a scalar is and don't know what scalar type you have... More...
class	SEHemorrhage
class	SEHepaticSystem
class	SEHistogram
class	SEHistogramFractionVsLength
class	SEImpairedAlveolarExchange
class	SEInfection
class	SEInflammatoryResponse
class	SEInhaler
class	SEInhalerAction
class	SEInhalerActionCollection
class	SEInhalerConfiguration
class	SEInitialEnvironment
class	SEInspiratoryValveLeak
class	SEInspiratoryValveObstruction
class	SEIntubation
class	SELiquidCompartment
class	SELiquidCompartmentDataRequest
class	SELiquidCompartmentGraph
class	SELiquidCompartmentLink
class	SELiquidSubstanceQuantity
class	SELobarPneumonia
class	SEMaskLeak
class	SEMechanicalVentilation
class	SENasalState
class	SENeedleDecompression
class	SENervousSystem
class	SENutrition
class	SEOverride
class	SEOxygenTankPressureLoss
class	SEOxygenWallPortPressureLoss
class	SEPainStimulus
class	SEPatient
class	SEPatientAction
class	SEPatientActionCollection
class	SEPatientAssessment
	Data formed at a level of a clinicians report. This is high level data, such as a mean or generalized data value intended to give a genaral overview of the patient (SEPatientAssessment) or other systems. More...
class	SEPatientAssessmentRequest
class	SEPatientCondition
class	SEPatientDataRequest
class	SEPericardialEffusion
class	SEPharmacodynamicModifier
class	SEPhysiologyDataRequest
class	SEProperty
class	SEPsychomotorVigilanceTask
class	SEPulmonaryFunctionTest
class	SEPupillaryResponse
class	SERenalSystem
class	SERespiratorySystem
class	Serializer
class	SEScalar
class	SEScalar0To1
class	SEScalarAmount
class	SEScalarAmountPerMass
class	SEScalarAmountPerTime
class	SEScalarAmountPerVolume
class	SEScalarArea
class	SEScalarAreaPerTimePressure
class	SEScalarElectricCapacitance
class	SEScalarElectricCharge
class	SEScalarElectricCurrent
class	SEScalarElectricInductance
class	SEScalarElectricPotential
class	SEScalarElectricResistance
class	SEScalarEnergy
class	SEScalarEnergyPerAmount
class	SEScalarEnergyPerMass
class	SEScalarFlowCompliance
class	SEScalarFlowElastance
class	SEScalarFlowInertance
class	SEScalarFlowResistance
class	SEScalarForce
class	SEScalarFraction
class	SEScalarFrequency
class	SEScalarHeatCapacitance
class	SEScalarHeatCapacitancePerAmount
class	SEScalarHeatCapacitancePerMass
class	SEScalarHeatConductance
class	SEScalarHeatConductancePerArea
class	SEScalarHeatInductance
class	SEScalarHeatResistance
class	SEScalarHeatResistanceArea
class	SEScalarInversePressure
class	SEScalarInverseVolume
class	SEScalarLength
class	SEScalarLengthPerTime
class	SEScalarLengthPerTimePressure
class	SEScalarMass
class	SEScalarMassPerAmount
class	SEScalarMassPerAreaTime
class	SEScalarMassPerMass
class	SEScalarMassPerTime
class	SEScalarMassPerVolume
class	SEScalarNeg1To1
class	SEScalarOsmolality
class	SEScalarOsmolarity
class	SEScalarPower
class	SEScalarPowerPerAreaTemperatureToTheFourth
class	SEScalarPressure
class	SEScalarPressurePerVolume
class	SEScalarPressureTimePerArea
class	SEScalarPressureTimePerVolumeArea
class	SEScalarQuantity
class	SEScalarTemperature
class	SEScalarTime
class	SEScalarTimeMassPerVolume
class	SEScalarVolume
class	SEScalarVolumePerPressure
class	SEScalarVolumePerTime
class	SEScalarVolumePerTimeArea
class	SEScalarVolumePerTimeMass
class	SEScalarVolumePerTimePressure
class	SEScalarVolumePerTimePressureArea
class	SEScenario
class	SEScenarioAutoSerialization
class	SEScenarioCustomExec
class	SEScenarioExec
class	SEScenarioInitialParameters
class	SESequentialOrganFailureAssessment
class	SESerializeState
class	SESleep
class	SESodaLimeFailure
class	SEStarvation
class	SESubstance
class	SESubstanceAdministration
class	SESubstanceAerosolization
class	SESubstanceBolus
class	SESubstanceBolusState
class	SESubstanceClearance
class	SESubstanceCompound
class	SESubstanceCompoundInfusion
class	SESubstanceConcentration
class	SESubstanceDataRequest
class	SESubstanceFraction
class	SESubstanceInfusion
class	SESubstanceManager
class	SESubstanceNasalDose
class	SESubstanceOralDose
class	SESubstancePharmacodynamics
class	SESubstancePharmacokinetics
class	SESubstancePhysicochemicals
class	SESubstanceQuantity
class	SESubstanceTissuePharmacokinetics
class	SESubstanceTransportAmount
class	SESubstanceTransportEdge
class	SESubstanceTransporter
class	SESubstanceTransportGraph
class	SESubstanceTransportVertex
class	SESystem
class	SETensionPneumothorax
class	SETestCase
class	SETestErrorStatistics
class	SETestReport
class	SETestSuite
class	SEThermalApplication
class	SEThermalCircuit
class	SEThermalCircuitCalculator
class	SEThermalCircuitNode
class	SEThermalCircuitPath
class	SEThermalCompartment
class	SEThermalCompartmentDataRequest
class	SEThermalCompartmentGraph
class	SEThermalCompartmentLink
class	SETissueCompartment
class	SETissueCompartmentDataRequest
class	SETissueSystem
class	SETourniquet
class	SETransmucosalState
class	SETubeCuffLeak
class	SEUnitScalar
class	SEUrinalysis
class	SEUrinalysisMicroscopic
class	SEUrinate
class	SEUseInhaler
class	SEVaporizerFailure
class	SEVentilatorPressureLoss
class	SEYPieceDisconnect
class	SizeIndependentDepositionEfficencyCoefficient
struct	SmartEnum
struct	SUnitStringToken
class	Task
	Interface from which tasks used in the TaskRunner should derive. More...
class	TaskProcessor
	This class is a functor used in threads launched by the TaskRunner. It's responsibility is to pull and run Tasks from the TaskRunner until the Task queue is empty. More...
class	TaskQueue
	Interface through which TaskProcessors retrieve Tasks from the TaskRunner. More...
class	TaskRunner
	This class handles concurrent execution of tasks. More...
class	TemperatureUnit
class	TimeMassPerVolumeUnit
struct	Timer
class	TimeUnit
class	TimingProfile
class	Tissue
	This class encapsulates logic necessary to connect independent systems together. More...
class	VolumePerPressureUnit
class	VolumePerTimeAreaUnit
class	VolumePerTimeMassUnit
class	VolumePerTimePressureAreaUnit
class	VolumePerTimePressureUnit
class	VolumePerTimeUnit
class	VolumeUnit

Typedefs
using	SEGasTransportSubstance = SESubstanceTransportAmount< SEScalarVolume, SEScalarFraction >
using	SELiquidTransportSubstance = SESubstanceTransportAmount< SEScalarMass, SEScalarMassPerVolume >
using	SEGasTransportVertex = SESubstanceTransportVertex< SEScalarVolume, SEScalarVolume, SEScalarFraction >
using	SELiquidTransportVertex = SESubstanceTransportVertex< SEScalarVolume, SEScalarMass, SEScalarMassPerVolume >
using	SEGasTransportEdge = SESubstanceTransportEdge< SEScalarVolumePerTime, SEScalarVolume, SEScalarVolume, SEScalarFraction >
using	SELiquidTransportEdge = SESubstanceTransportEdge< SEScalarVolumePerTime, SEScalarVolume, SEScalarMass, SEScalarMassPerVolume >
using	SEGasTransportGraph = SESubstanceTransportGraph< SEScalarVolumePerTime, SEScalarVolume, SEScalarVolume, SEScalarFraction >
using	SELiquidTransportGraph = SESubstanceTransportGraph< SEScalarVolumePerTime, SEScalarVolume, SEScalarMass, SEScalarMassPerVolume >
using	SEGasTransporter = SESubstanceTransporter< SEGasTransportGraph, VolumePerTimeUnit, VolumeUnit, VolumeUnit, NoUnit >
using	SELiquidTransporter = SESubstanceTransporter< SELiquidTransportGraph, VolumePerTimeUnit, VolumeUnit, MassUnit, MassPerVolumeUnit >
typedef std::map< std::string, double >	ProbeMap
typedef std::map< std::string, double >::iterator	ProbeMapItr
typedef std::map< std::string, std::vector< double > * >	TrackMap
typedef std::map< std::string, std::vector< double > * >::iterator	TrackMapItr
typedef std::map< std::string, SEDecimalFormat >	FormattingMap

Enumerations
enum	BalanceGasBy { BalanceGasBy::Volume, BalanceGasBy::VolumeFraction }
enum	BalanceLiquidBy { BalanceLiquidBy::Mass, BalanceLiquidBy::Concentration, BalanceLiquidBy::Molarity, BalanceLiquidBy::PartialPressure }
enum	CompartmentUpdate {   CompartmentUpdate::None, CompartmentUpdate::InFlow, CompartmentUpdate::OutFlow, CompartmentUpdate::HeatTransferRateIn,   CompartmentUpdate::HeatTransferRateOut, CompartmentUpdate::Volume, CompartmentUpdate::Pressure, CompartmentUpdate::Heat,   CompartmentUpdate::Temperature, CompartmentUpdate::VolumeFraction, CompartmentUpdate::Mass, CompartmentUpdate::Concentration,   CompartmentUpdate::pH, CompartmentUpdate::Molarity, CompartmentUpdate::PartialPressure, CompartmentUpdate::Saturation }
enum	DecimalNotation { DecimalNotation::Default, DecimalNotation::Fixed, DecimalNotation::Scientific }
enum	RenalDynamic { RenalDynamic::Clearance, RenalDynamic::Regulation }
enum	State { State::Ready, State::Running, State::Ran }
enum	EngineState {   EngineState::NotReady = 0, EngineState::Initialization, EngineState::InitialStabilization, EngineState::AtInitialStableState,   EngineState::SecondaryStabilization, EngineState::AtSecondaryStableState, EngineState::Active }
enum	enumCDMTestSourceType { DC, SIN, PULSE, ZEROCENTEREDSIN }
enum	Driver { Sinusoid = 0, Heart }

Functions
template<class _InIt >
size_t	_Hash_value (_InIt _Begin, _InIt _End)
template<class T >
void	Copy (const std::vector< T * > &from, std::vector< T * > &to)
template<class T >
void	Copy (const std::vector< T > &from, std::vector< T > &to)
template<class T >
bool	Contains (const std::vector< T * > &v, T &item)
template<class T >
void	Remove (std::vector< T * > &v, T *item)
template<class T >
void	Copy (const std::vector< T * > &from, std::vector< const T * > &to)
template<class T >
void	DELETE_VECTOR (std::vector< T > &vec)
template<class T , class K >
void	DELETE_MAP_SECOND (std::map< T, K > &map)
template<typename valueType >
bool	SameSign (valueType x, valueType y)
std::ostream &	operator<< (std::ostream &out, const SEConsciousRespirationCommand &c)
std::ostream &	operator<< (std::ostream &out, const SENutrition &n)
SEScalar	operator+ (double lhs, const SEScalar &rhs)
SEScalar	operator- (double lhs, const SEScalar &rhs)
SEScalar	operator/ (double lhs, const SEScalar &rhs)
SEScalar	operator* (double lhs, const SEScalar &rhs)
bool	operator< (double lhs, const SEScalar &rhs)
bool	operator<= (double lhs, const SEScalar &rhs)
bool	operator> (double lhs, const SEScalar &rhs)
bool	operator>= (double lhs, const SEScalar &rhs)
bool	operator== (double lhs, const SEScalar &rhs)
bool	operator!= (double lhs, const SEScalar &rhs)
std::ostream &	operator<< (std::ostream &out, const SEScalar *s)
std::ostream &	operator<< (std::ostream &out, const SEScalar &s)
void	Override (const SEScalar &from, SEScalar &to)
void	ValueOverride (SEScalar &s, double value)
void	IncrementOverride (SEScalar &s, double value)
template<class Unit >
void	Override (const SEScalarQuantity< Unit > &from, SEScalarQuantity< Unit > &to)
template<class Unit >
void	ValueOverride (SEScalarQuantity< Unit > &s, double value, const Unit &unit)
template<class Unit >
void	IncrementOverride (SEScalarQuantity< Unit > &s, double value, const Unit &unit)
std::ostream &	operator<< (std::ostream &out, const SEAction &a)
std::ostream &	operator<< (std::ostream &out, const SECondition &a)
BIOGEARS_API bool	CreateFilePath (const std::string &)
BIOGEARS_API bool	CreateFilePath (const char *)
BIOGEARS_API std::string	Replace (const std::string &original, const std::string &replace, const std::string &withThis)
BIOGEARS_API void	ListFiles (const std::string &dir, std::vector< std::string > &files, const std::string &mask="", bool recurse=true)
BIOGEARS_API std::vector< std::string >	ListFiles (const std::string &dir, const std::string &regex, bool recurse=true)
BIOGEARS_API bool	IsAbsolutePath (const std::string &path)
BIOGEARS_API bool	IsAbsolutePath (const char *path)
BIOGEARS_API std::string	ResolvePath (const std::string &path)
BIOGEARS_API const char *	ResolvePath_cStr (const char *path)
	This call is very unsafe when using threading. The lifetime of the char* returned is until the next call of ResolvePath. Copy this return value immediatly after the call to avoid most issues. More...
BIOGEARS_API void	SetCurrentWorkingDirectory (std::string working_dir)
BIOGEARS_API void	SetCurrentWorkingDirectory (const char *working_dir)
BIOGEARS_API bool	TestLastDirName (std::string path, std::string dirname)
BIOGEARS_API bool	TestFirstDirName (std::string path, std::string dirname)
BIOGEARS_API bool	TestLastDirName (const char *path, const char *dirname)
BIOGEARS_API bool	TestFirstDirName (const char *path, const char *dirname)
BIOGEARS_API std::string	GetCurrentWorkingDirectory ()
BIOGEARS_API const char *	GetCurrentWorkingDirectory_cStr ()
BIOGEARS_API void	DeleteDirectory (const std::string &dir, bool bDeleteSubdirectories=true)
BIOGEARS_API void	MakeDirectory (const std::string &dir)
bool BIOGEARS_API	IsDirectory (dirent *ent)
CCompoundUnit	pow (const CCompoundUnit &baseref, CCompoundUnitElement::ExponentType exp)
CCompoundUnit	sqrt (const CCompoundUnit &argref)
std::ostream &	operator<< (std::ostream &out, const CCompoundUnit &ccu)
std::ostream &	operator<< (std::ostream &out, const CCompoundUnit *ccu)
double BIOGEARS_API	Convert (double d, const CCompoundUnit &from, const CCompoundUnit &to)
bool BIOGEARS_API	CompatibleUnits (const CCompoundUnit &from, const CCompoundUnit &to)
CPScalar	pow (const CPScalar &baseref, double pwr)
CPScalar	pow (const CPScalar &baseref, int pwr)
CPScalar	sqrt (const CPScalar &argref)
CPScalar	abs (const CPScalar &argref)
std::ostream &	operator<< (std::ostream &output, const CPScalar &self)
template<class T >
CPScalar	operator* (const CPScalar &lhs, const T &rhs)
template<class T >
CPScalar	operator* (const T &lhs, const CPScalar &rhs)
template<class T >
CPScalar &	operator*= (CPScalar &lhs, const T &rhs)
template<class T >
CPScalar	operator/ (const CPScalar &lhs, const T &rhs)
template<class T >
CPScalar	operator/ (const T &lhs, const CPScalar &rhs)
template<class T >
CPScalar &	operator/= (CPScalar &lhs, const T &rhs)
template<class T >
CPScalar	operator+ (const CPScalar &lhs, const T &rhs)
template<class T >
CPScalar	operator+ (const T &lhs, const CPScalar &rhs)
template<class T >
CPScalar	operator- (const CPScalar &lhs, const T &rhs)
template<class T >
CPScalar	operator- (const T &lhs, const CPScalar &rhs)
template<class T >
bool	operator< (const CPScalar &lhs, const T &rhs)
template<class T >
bool	operator< (const T &lhs, const CPScalar &rhs)
template<class T >
bool	operator<= (const CPScalar &lhs, const T &rhs)
template<class T >
bool	operator<= (const T &lhs, const CPScalar &rhs)
template<class T >
bool	operator> (const CPScalar &lhs, const T &rhs)
template<class T >
bool	operator> (const T &lhs, const CPScalar &rhs)
template<class T >
bool	operator>= (const CPScalar &lhs, const T &rhs)
template<class T >
bool	operator>= (const T &lhs, const CPScalar &rhs)
template<class T >
bool	operator== (const CPScalar &lhs, const T &rhs)
template<class T >
bool	operator== (const T &lhs, const CPScalar &rhs)
template<class T >
bool	operator!= (const CPScalar &lhs, const T &rhs)
template<class T >
bool	operator!= (const T &lhs, const CPScalar &rhs)
size_t	hash_value (const CQuantityConversionKey &ref)
const CUnitDimension	operator* (const double &lhs, const CUnitDimension &rhs)
size_t	hash_value (const CUnitDimension &ref)
BIOGEARS_API std::unique_ptr< biogears::PhysiologyEngine >	CreateBioGearsEngine (biogears::Logger *logger=nullptr)
BIOGEARS_API std::unique_ptr< biogears::PhysiologyEngine >	CreateBioGearsEngine (const std::string logfile="")
BIOGEARS_API std::unique_ptr< biogears::PhysiologyEngine >	CreateBioGearsEngine (const char *logfile="")
BIOGEARS_API std::unique_ptr< biogears::PhysiologyEngine >	CreateBioGearsEngine (const std::string working_dir, const std::string logfile)
BIOGEARS_API std::unique_ptr< biogears::PhysiologyEngine >	CreateBioGearsEngine (const char *working_dir, const char *logfile)
BIOGEARS_API std::unique_ptr< biogears::PhysiologyEngine >	CreateBioGearsEngine (const std::string working_dir, biogears::Logger *logger)
BIOGEARS_API std::unique_ptr< biogears::PhysiologyEngine >	CreateBioGearsEngine (const char *working_dir, biogears::Logger *logger)
BIOGEARS_API std::string	version_string ()
BIOGEARS_API char const *	version_string_str ()
BIOGEARS_API std::string	full_version_string ()
BIOGEARS_API char const *	full_version_string_str ()
BIOGEARS_API std::string	project_name ()
BIOGEARS_API char const *	project_name_str ()
BIOGEARS_API std::string	rev_hash ()
BIOGEARS_API char const *	rev_hash_str ()
BIOGEARS_API std::string	rev_tag ()
BIOGEARS_API char const *	rev_tag_str ()
BIOGEARS_API int	rev_offset ()
BIOGEARS_API int	biogears_major_version ()
BIOGEARS_API int	biogears_minor_version ()
BIOGEARS_API int	biogears_patch_version ()
BIOGEARS_API bool	biogears_offical_release ()
BIOGEARS_API std::string	rev_commit_date ()
BIOGEARS_API char const *	rev_commit_date_str ()
BIOGEARS_API std::string	biogears_build_date ()
BIOGEARS_API const char *	biogears_build_date_str ()
std::string	Space2Underscore (const std::string &str)
double	ComputeWeightedRate (double amt1, double amt2, double rate1, double rate2)
bool	IsDirectory (struct::dirent *ent)
bool	CIEQUAL (std::string strA, std::string strB)
void	CalculateMultipliers (double &dsResistanceMultiplier, double &usResistanceMultiplier, const double &map_mmHg, const double &cvp_mmHg, const SEFluidCircuitPath *brainResistanceDownstream, const SEFluidCircuitPath *brainResistanceUpstream)
double	TotalHbMols (SELiquidCompartmentGraph &Graph, SESubstance &Hb, SESubstance &HbO2, SESubstance &HbO2CO2, SESubstance &HbCO2)
std::chrono::microseconds::rep	vectorAverage (std::vector< std::chrono::microseconds::rep > const &v)

Variables
static constexpr double	ZERO_APPROX = 1e-10
BIOGEARS_API std::recursive_mutex	g_fileSystemMutex
static std::stringstream	err
static std::stringstream	err
const std::string	unitless = "unitless"
constexpr char	idArterialBloodPH [] = "ArterialBloodPH"
constexpr char	idArterialBloodPHBaseline [] = "ArterialBloodPHBaseline"
constexpr char	idBloodDensity [] = "BloodDensity"
constexpr char	idBloodSpecificHeat [] = "BloodSpecificHeat"
constexpr char	idBloodUreaNitrogenConcentration [] = "BloodUreaNitrogenConcentration"
constexpr char	idCarbonDioxideSaturation [] = "CarbonDioxideSaturation"
constexpr char	idCarbonMonoxideSaturation [] = "CarbonMonoxideSaturation"
constexpr char	idHematocrit [] = "Hematocrit"
constexpr char	idHemoglobinContent [] = "HemoglobinContent"
constexpr char	idHemoglobinLostToUrine [] = "HemoglobinLostToUrine"
constexpr char	idOxygenSaturation [] = "OxygenSaturation"
constexpr char	idOxygenVenousSaturation [] = "OxygenVenousSaturation"
constexpr char	idPhosphate [] = "Phosphate"
constexpr char	idPlasmaVolume [] = "PlasmaVolume"
constexpr char	idPulseOximetry [] = "PulseOximetry"
constexpr char	idRedBloodCellAcetylcholinesterase [] = "RedBloodCellAcetylcholinesterase"
constexpr char	idRedBloodCellCount [] = "RedBloodCellCount"
constexpr char	idRhTransfusionReactionVolume [] = "RhTransfusionReactionVolume"
constexpr char	idShuntFraction [] = "ShuntFraction"
constexpr char	idStrongIonDifference [] = "StrongIonDifference"
constexpr char	idTotalBilirubin [] = "TotalBilirubin"
constexpr char	idTotalProteinConcentration [] = "TotalProteinConcentration"
constexpr char	idVenousBloodPH [] = "VenousBloodPH"
constexpr char	idVolumeFractionNeutralPhospholipidInPlasma [] = "VolumeFractionNeutralPhospholipidInPlasma"
constexpr char	idVolumeFractionNeutralLipidInPlasma [] = "VolumeFractionNeutralLipidInPlasma"
constexpr char	idWhiteBloodCellCount [] = "WhiteBloodCellCount"
constexpr char	idArterialCarbonDioxidePressure [] = "ArterialCarbonDioxidePressure"
constexpr char	idArterialOxygenPressure [] = "ArterialOxygenPressure"
constexpr char	idPulmonaryArterialCarbonDioxidePressure [] = "PulmonaryArterialCarbonDioxidePressure"
constexpr char	idPulmonaryArterialOxygenPressure [] = "PulmonaryArterialOxygenPressure"
constexpr char	idPulmonaryVenousCarbonDioxidePressure [] = "PulmonaryVenousCarbonDioxidePressure"
constexpr char	idPulmonaryVenousOxygenPressure [] = "PulmonaryVenousOxygenPressure"
constexpr char	idVenousCarbonDioxidePressure [] = "VenousCarbonDioxidePressure"
constexpr char	idVenousOxygenPressure [] = "VenousOxygenPressure"
constexpr char	idInflammtoryRespone [] = "InflammatoryResponse"
constexpr char	idLocalPathogen [] = "LocalPathogen"
constexpr char	idLocalMacrophage [] = "LocalMacrophage"
constexpr char	idLocalNeutrophil [] = "LocalNeutrophil"
constexpr char	idLocalBarrier [] = "LocalBarrier"
constexpr char	idBloodPathogen [] = "BloodPathogen"
constexpr char	idTrauma [] = "Trauma"
constexpr char	idAutonomicResponseLevel [] = "AutonomicResponseLevel"
constexpr char	idMacrophageResting [] = "MacrophageResting"
constexpr char	idMacrophageActive [] = "MacrophageActive"
constexpr char	idNeutrophilResting [] = "NeutrophilResting"
constexpr char	idNeutrophilActive [] = "NeutrophilActive"
constexpr char	idInducibleNOSPre [] = "InducibleNOSPre"
constexpr char	idInducibleNOS [] = "InducibleNOS"
constexpr char	idConstitutiveNOS [] = "ConstitutiveNOS"
constexpr char	idNitrate [] = "Nitrate"
constexpr char	idNitricOxide [] = "NitricOxide"
constexpr char	idTumorNecrosisFactor [] = "TumorNecrosisFactor"
constexpr char	idInterleukin6 [] = "Interleukin6"
constexpr char	idInterleukin10 [] = "Interleukin10"
constexpr char	idInterleukin12 [] = "Interleukin12"
constexpr char	idCatecholamines [] = "Catecholamines"
constexpr char	idTissueIntegrity [] = "TissueIntegrity"
constexpr char	idInflammationTime [] = "InflammationTime"
constexpr char	idArterialPressure [] = "ArterialPressure"
constexpr char	idBloodVolume [] = "BloodVolume"
constexpr char	idCardiacIndex [] = "CardiacIndex"
constexpr char	idCardiacOutput [] = "CardiacOutput"
constexpr char	idCentralVenousPressure [] = "CentralVenousPressure"
constexpr char	idCerebralBloodFlow [] = "CerebralBloodFlow"
constexpr char	idCerebralPerfusionPressure [] = "CerebralPerfusionPressure"
constexpr char	idDiastolicArterialPressure [] = "DiastolicArterialPressure"
constexpr char	idHeartEjectionFraction [] = "HeartEjectionFraction"
constexpr char	idHeartRate [] = "HeartRate"
constexpr char	idHeartStrokeVolume [] = "HeartStrokeVolume"
constexpr char	idIntracranialPressure [] = "IntracranialPressure"
constexpr char	idMeanArterialPressure [] = "MeanArterialPressure"
constexpr char	idMeanArterialCarbonDioxidePartialPressure [] = "MeanArterialCarbonDioxidePartialPressure"
constexpr char	idMeanArterialCarbonDioxidePartialPressureDelta [] = "MeanArterialCarbonDioxidePartialPressureDelta"
constexpr char	idMeanCentralVenousPressure [] = "MeanCentralVenousPressure"
constexpr char	idMeanSkinFlow [] = "MeanSkinFlow"
constexpr char	idPulmonaryArterialPressure [] = "PulmonaryArterialPressure"
constexpr char	idPulmonaryCapillariesWedgePressure [] = "PulmonaryCapillariesWedgePressure"
constexpr char	idPulmonaryDiastolicArterialPressure [] = "PulmonaryDiastolicArterialPressure"
constexpr char	idPulmonaryMeanArterialPressure [] = "PulmonaryMeanArterialPressure"
constexpr char	idPulmonaryMeanCapillaryFlow [] = "PulmonaryMeanCapillaryFlow"
constexpr char	idPulmonaryMeanShuntFlow [] = "PulmonaryMeanShuntFlow"
constexpr char	idPulmonarySystolicArterialPressure [] = "PulmonarySystolicArterialPressure"
constexpr char	idPulmonaryVascularResistance [] = "PulmonaryVascularResistance"
constexpr char	idPulmonaryVascularResistanceIndex [] = "PulmonaryVascularResistanceIndex"
constexpr char	idPulsePressure [] = "PulsePressure"
constexpr char	idSystemicVascularResistance [] = "SystemicVascularResistance"
constexpr char	idSystolicArterialPressure [] = "SystolicArterialPressure"
constexpr char	idAntibioticActivity [] = "AntibioticActivity"
constexpr char	idBronchodilationLevel [] = "BronchodilationLevel"
constexpr char	idFeverChange [] = "FeverChange"
constexpr char	idHeartRateChange [] = "HeartRateChange"
constexpr char	idHemorrhageChange [] = "HemorrhageChange"
constexpr char	idMeanBloodPressureChange [] = "MeanBloodPressureChange"
constexpr char	idNeuromuscularBlockLevel [] = "NeuromuscularBlockLevel"
constexpr char	idPainToleranceChange [] = "PainToleranceChange"
constexpr char	idPulsePressureChange [] = "PulsePressureChange"
constexpr char	idRespirationRateChange [] = "RespirationRateChange"
constexpr char	idSedationLevel [] = "SedationLevel"
constexpr char	idTidalVolumeChange [] = "TidalVolumeChange"
constexpr char	idTubularPermeabilityChange [] = "TubularPermeabilityChange"
constexpr char	idCentralNervousResponse [] = "CentralNervousResponse"
constexpr char	idPupillaryResponse [] = "PupillaryResponse"
constexpr char	idInsulinSynthesisRate [] = "InsulinSynthesisRate"
constexpr char	idGlucagonSynthesisRate [] = "GlucagonSynthesisRate"
constexpr char	idAchievedExerciseLevel [] = "AchievedExerciseLevel"
constexpr char	idChlorideLostToSweat [] = "ChlorideLostToSweat"
constexpr char	idCoreTemperature [] = "CoreTemperature"
constexpr char	idCreatinineProductionRate [] = "CreatinineProductionRate"
constexpr char	idEnergyDeficit [] = "EnergyDeficit"
constexpr char	idExerciseEnergyDemand [] = "ExerciseEnergyDemand"
constexpr char	idExerciseMeanArterialPressureDelta [] = "ExerciseMeanArterialPressureDelta"
constexpr char	idFatigueLevel [] = "FatigueLevel"
constexpr char	idLactateProductionRate [] = "LactateProductionRate"
constexpr char	idPotassiumLostToSweat [] = "PotassiumLostToSweat"
constexpr char	idSkinTemperature [] = "SkinTemperature"
constexpr char	idSodiumLostToSweat [] = "SodiumLostToSweat"
constexpr char	idSweatRate [] = "SweatRate"
constexpr char	idTotalMetabolicRate [] = "TotalMetabolicRate"
constexpr char	idTotalWorkRateLevel [] = "TotalWorkRateLevel"
constexpr char	idChymeAbsorptionRate [] = "ChymeAbsorptionRate"
constexpr char	idStomachContents [] = "StomachContents"
constexpr char	idKetoneProductionRate [] = "KetoneProductionRate"
constexpr char	idHepaticGluconeogenesisRate [] = "HepaticGluconeogenesisRate"
constexpr char	idAttentionLapses [] = "AttentionLapses"
constexpr char	idBiologicalDebt [] = "BiologicalDebt"
constexpr char	idComplianceScale [] = "ComplianceScale"
constexpr char	idHeartRateScale [] = "HeartRateScale"
constexpr char	idHeartElastanceScale [] = "HeartElastanceScale"
constexpr char	idPainVisualAnalogueScale [] = "PainVisualAnalogueScale"
constexpr char	idLeftEyePupillaryResponse [] = "LeftEyePupillaryResponse"
constexpr char	idRightEyePupillaryResponse [] = "RightEyePupillaryResponse"
constexpr char	idReactionTime [] = "ReactionTime"
constexpr char	idResistanceScaleExtrasplanchnic [] = "ResistanceScaleExtrasplanchnic"
constexpr char	idResistanceScaleMuscle [] = "ResistanceScaleMuscle"
constexpr char	idResistanceScaleMyocardium [] = "ResistanceScaleMyocardium"
constexpr char	idResistanceScaleSplanchnic [] = "ResistanceScaleSplanchnic"
constexpr char	idSleepTime [] = "SleepTime"
constexpr char	idWakeTime [] = "WakeTime"
constexpr char	idRichmondAgitationSedationScale [] = "RichmondAgitationSedationScale"
constexpr char	idGlomerularFiltrationRate [] = "GlomerularFiltrationRate"
constexpr char	idFiltrationFraction [] = "FiltrationFraction"
constexpr char	idLeftAfferentArterioleResistance [] = "LeftAfferentArterioleResistance"
constexpr char	idLeftBowmansCapsulesHydrostaticPressure [] = "LeftBowmansCapsulesHydrostaticPressure"
constexpr char	idLeftBowmansCapsulesOsmoticPressure [] = "LeftBowmansCapsulesOsmoticPressure"
constexpr char	idLeftEfferentArterioleResistance [] = "LeftEfferentArterioleResistance"
constexpr char	idLeftGlomerularCapillariesHydrostaticPressure [] = "LeftGlomerularCapillariesHydrostaticPressure"
constexpr char	idLeftGlomerularCapillariesOsmoticPressure [] = "LeftGlomerularCapillariesOsmoticPressure"
constexpr char	idLeftGlomerularFiltrationCoefficient [] = "LeftGlomerularFiltrationCoefficient"
constexpr char	idLeftGlomerularFiltrationRate [] = "LeftGlomerularFiltrationRate"
constexpr char	idLeftGlomerularFiltrationSurfaceArea [] = "LeftGlomerularFiltrationSurfaceArea"
constexpr char	idLeftGlomerularFluidPermeability [] = "LeftGlomerularFluidPermeability"
constexpr char	idLeftFiltrationFraction [] = "LeftFiltrationFraction"
constexpr char	idLeftNetFiltrationPressure [] = "LeftNetFiltrationPressure"
constexpr char	idLeftNetReabsorptionPressure [] = "LeftNetReabsorptionPressure"
constexpr char	idLeftPeritubularCapillariesHydrostaticPressure [] = "LeftPeritubularCapillariesHydrostaticPressure"
constexpr char	idLeftPeritubularCapillariesOsmoticPressure [] = "LeftPeritubularCapillariesOsmoticPressure"
constexpr char	idLeftReabsorptionFiltrationCoefficient [] = "LeftReabsorptionFiltrationCoefficient"
constexpr char	idLeftReabsorptionRate [] = "LeftReabsorptionRate"
constexpr char	idLeftTubularReabsorptionFiltrationSurfaceArea [] = "LeftTubularReabsorptionFiltrationSurfaceArea"
constexpr char	idLeftTubularReabsorptionFluidPermeability [] = "LeftTubularReabsorptionFluidPermeability"
constexpr char	idLeftTubularHydrostaticPressure [] = "LeftTubularHydrostaticPressure"
constexpr char	idLeftTubularOsmoticPressure [] = "LeftTubularOsmoticPressure"
constexpr char	idRenalBloodFlow [] = "RenalBloodFlow"
constexpr char	idRenalPlasmaFlow [] = "RenalPlasmaFlow"
constexpr char	idRenalVascularResistance [] = "RenalVascularResistance"
constexpr char	idRightAfferentArterioleResistance [] = "RightAfferentArterioleResistance"
constexpr char	idRightBowmansCapsulesHydrostaticPressure [] = "RightBowmansCapsulesHydrostaticPressure"
constexpr char	idRightBowmansCapsulesOsmoticPressure [] = "RightBowmansCapsulesOsmoticPressure"
constexpr char	idRightEfferentArterioleResistance [] = "RightEfferentArterioleResistance"
constexpr char	idRightGlomerularCapillariesHydrostaticPressure [] = "RightGlomerularCapillariesHydrostaticPressure"
constexpr char	idRightGlomerularCapillariesOsmoticPressure [] = "RightGlomerularCapillariesOsmoticPressure"
constexpr char	idRightGlomerularFiltrationCoefficient [] = "RightGlomerularFiltrationCoefficient"
constexpr char	idRightGlomerularFiltrationRate [] = "RightGlomerularFiltrationRate"
constexpr char	idRightGlomerularFiltrationSurfaceArea [] = "RightGlomerularFiltrationSurfaceArea"
constexpr char	idRightGlomerularFluidPermeability [] = "RightGlomerularFluidPermeability"
constexpr char	idRightFiltrationFraction [] = "RightFiltrationFraction"
constexpr char	idRightNetFiltrationPressure [] = "RightNetFiltrationPressure"
constexpr char	idRightNetReabsorptionPressure [] = "RightNetReabsorptionPressure"
constexpr char	idRightPeritubularCapillariesHydrostaticPressure [] = "RightPeritubularCapillariesHydrostaticPressure"
constexpr char	idRightPeritubularCapillariesOsmoticPressure [] = "RightPeritubularCapillariesOsmoticPressure"
constexpr char	idRightReabsorptionFiltrationCoefficient [] = "RightReabsorptionFiltrationCoefficient"
constexpr char	idRightReabsorptionRate [] = "RightReabsorptionRate"
constexpr char	idRightTubularReabsorptionFiltrationSurfaceArea [] = "RightTubularReabsorptionFiltrationSurfaceArea"
constexpr char	idRightTubularReabsorptionFluidPermeability [] = "RightTubularReabsorptionFluidPermeability"
constexpr char	idRightTubularHydrostaticPressure [] = "RightTubularHydrostaticPressure"
constexpr char	idRightTubularOsmoticPressure [] = "RightTubularOsmoticPressure"
constexpr char	idUrinationRate [] = "UrinationRate"
constexpr char	idUrineOsmolality [] = "UrineOsmolality"
constexpr char	idUrineOsmolarity [] = "UrineOsmolarity"
constexpr char	idUrineProductionRate [] = "UrineProductionRate"
constexpr char	idMeanUrineOutput [] = "MeanUrineOutput"
constexpr char	idUrineSpecificGravity [] = "UrineSpecificGravity"
constexpr char	idUrineVolume [] = "UrineVolume"
constexpr char	idUrineUreaNitrogenConcentration [] = "UrineUreaNitrogenConcentration"
constexpr char	idAlveolarArterialGradient [] = "AlveolarArterialGradient"
constexpr char	idCarricoIndex [] = "CarricoIndex"
constexpr char	idEndTidalCarbonDioxideFraction [] = "EndTidalCarbonDioxideFraction"
constexpr char	idEndTidalCarbonDioxidePressure [] = "EndTidalCarbonDioxidePressure"
constexpr char	idExpiratoryFlow [] = "ExpiratoryFlow"
constexpr char	idInspiratoryExpiratoryRatio [] = "InspiratoryExpiratoryRatio"
constexpr char	idInspiratoryFlow [] = "InspiratoryFlow"
constexpr char	idPulmonaryCompliance [] = "PulmonaryCompliance"
constexpr char	idPulmonaryResistance [] = "PulmonaryResistance"
constexpr char	idMeanPleuralPressure [] = "MeanPleuralPressure"
constexpr char	idRespirationDriverFrequency [] = "RespirationDriverFrequency"
constexpr char	idRespirationDriverPressure [] = "RespirationDriverPressure"
constexpr char	idRespirationMusclePressure [] = "RespirationMusclePressure"
constexpr char	idRespirationRate [] = "RespirationRate"
constexpr char	idSpecificVentilation [] = "SpecificVentilation"
constexpr char	idTargetPulmonaryVentilation [] = "TargetPulmonaryVentilation"
constexpr char	idTidalVolume [] = "TidalVolume"
constexpr char	idTotalAlveolarVentilation [] = "TotalAlveolarVentilation"
constexpr char	idTotalDeadSpaceVentilation [] = "TotalDeadSpaceVentilation"
constexpr char	idTotalLungVolume [] = "TotalLungVolume"
constexpr char	idTotalPulmonaryVentilation [] = "TotalPulmonaryVentilation"
constexpr char	idTranspulmonaryPressure [] = "TranspulmonaryPressure"
constexpr char	idCarbonDioxideProductionRate [] = "CarbonDioxideProductionRate"
constexpr char	idDehydrationFraction [] = "DehydrationFraction"
constexpr char	idExtracellularFluidVolume [] = "ExtracellularFluidVolume"
constexpr char	idExtravascularFluidVolume [] = "ExtravascularFluidVolume"
constexpr char	idIntracellularFluidPH [] = "IntracellularFluidPH"
constexpr char	idIntracellularFluidVolume [] = "IntracellularFluidVolume"
constexpr char	idTotalBodyFluidVolume [] = "TotalBodyFluidVolume"
constexpr char	idOxygenConsumptionRate [] = "OxygenConsumptionRate"
constexpr char	idRespiratoryExchangeRatio [] = "RespiratoryExchangeRatio"
constexpr char	idLiverInsulinSetPoint [] = "LiverInsulinSetPoint"
constexpr char	idLiverGlucagonSetPoint [] = "LiverGlucagonSetPoint"
constexpr char	idMuscleInsulinSetPoint [] = "MuscleInsulinSetPoint"
constexpr char	idMuscleGlucagonSetPoint [] = "MuscleGlucagonSetPoint"
constexpr char	idFatInsulinSetPoint [] = "FatInsulinSetPoint"
constexpr char	idFatGlucagonSetPoint [] = "FatGlucagonSetPoint"
constexpr char	idLiverGlycogen [] = "LiverGlycogen"
constexpr char	idMuscleGlycogen [] = "MuscleGlycogen"
constexpr char	idStoredProtein [] = "StoredProtein"
constexpr char	idStoredFat [] = "StoredFat"
std::string	g_working_dir = ""
constexpr const char *	UCEDEFS_TEXT

Typedef Documentation

typedef std::map<std::string, SEDecimalFormat> biogears::FormattingMap

typedef std::map<std::string, double> biogears::ProbeMap

typedef std::map<std::string, double>::iterator biogears::ProbeMapItr

using biogears::SEGasTransportEdge = typedef SESubstanceTransportEdge<SEScalarVolumePerTime, SEScalarVolume, SEScalarVolume, SEScalarFraction>

using biogears::SEGasTransporter = typedef SESubstanceTransporter<SEGasTransportGraph, VolumePerTimeUnit, VolumeUnit, VolumeUnit, NoUnit>

using biogears::SEGasTransportGraph = typedef SESubstanceTransportGraph<SEScalarVolumePerTime, SEScalarVolume, SEScalarVolume, SEScalarFraction>

using biogears::SEGasTransportSubstance = typedef SESubstanceTransportAmount<SEScalarVolume, SEScalarFraction>

using biogears::SEGasTransportVertex = typedef SESubstanceTransportVertex<SEScalarVolume, SEScalarVolume, SEScalarFraction>

using biogears::SELiquidTransportEdge = typedef SESubstanceTransportEdge<SEScalarVolumePerTime, SEScalarVolume, SEScalarMass, SEScalarMassPerVolume>

using biogears::SELiquidTransporter = typedef SESubstanceTransporter<SELiquidTransportGraph, VolumePerTimeUnit, VolumeUnit, MassUnit, MassPerVolumeUnit>

using biogears::SELiquidTransportGraph = typedef SESubstanceTransportGraph<SEScalarVolumePerTime, SEScalarVolume, SEScalarMass, SEScalarMassPerVolume>

using biogears::SELiquidTransportSubstance = typedef SESubstanceTransportAmount<SEScalarMass, SEScalarMassPerVolume>

using biogears::SELiquidTransportVertex = typedef SESubstanceTransportVertex<SEScalarVolume, SEScalarMass, SEScalarMassPerVolume>

typedef std::map<std::string, std::vector<double>*> biogears::TrackMap

typedef std::map<std::string, std::vector<double>*>::iterator biogears::TrackMapItr

Enumeration Type Documentation

enum biogears::BalanceGasBy

strong

Enumerator
Volume
VolumeFraction

enum biogears::BalanceLiquidBy

strong

Enumerator
Mass
Concentration
Molarity
PartialPressure

enum biogears::CompartmentUpdate

strong

Enumerator
None
InFlow
OutFlow
HeatTransferRateIn
HeatTransferRateOut
Volume
Pressure
Heat
Temperature
VolumeFraction
Mass
Concentration
pH
Molarity
PartialPressure
Saturation

enum biogears::DecimalNotation

strong

Enumerator
Default
Fixed
Scientific

enum biogears::Driver

Enumerator
Sinusoid
Heart

enum biogears::EngineState

strong

Enumerator
NotReady
Initialization
InitialStabilization
AtInitialStableState
SecondaryStabilization
AtSecondaryStableState
Active

enum biogears::enumCDMTestSourceType

Enumerator
DC
SIN
PULSE
ZEROCENTEREDSIN

enum biogears::RenalDynamic

strong

Enumerator
Clearance
Regulation

enum biogears::State

strong

Enumerator
Ready
Running
Ran

Function Documentation

template<class _InIt >

size_t biogears::_Hash_value ( _InIt  _Begin, _InIt  _End  )

inline

CPScalar biogears::abs ( const CPScalar &  argref )

inline

BIOGEARS_API std::string biogears::biogears_build_date

(

)

BIOGEARS_API const char* biogears::biogears_build_date_str

(

)

BIOGEARS_API int biogears::biogears_major_version

(

)

BIOGEARS_API int biogears::biogears_minor_version

(

)

BIOGEARS_API bool biogears::biogears_offical_release

(

)

BIOGEARS_API int biogears::biogears_patch_version

(

)

void biogears::CalculateMultipliers	(	double &	dsResistanceMultiplier,
		double &	usResistanceMultiplier,
		const double &	map_mmHg,
		const double &	cvp_mmHg,
		const SEFluidCircuitPath *	brainResistanceDownstream,
		const SEFluidCircuitPath *	brainResistanceUpstream
	)

bool biogears::CIEQUAL ( std::string  strA, std::string  strB  )

inline

bool biogears::CompatibleUnits	(	const CCompoundUnit &	from,
		const CCompoundUnit &	to
	)

double biogears::ComputeWeightedRate	(	double	amt1,
		double	amt2,
		double	rate1,
		double	rate2
	)

template<class T >

bool biogears::Contains ( const std::vector< T * > &  v, T &  item  )

inline

double biogears::Convert	(	double	d,
		const CCompoundUnit &	from,
		const CCompoundUnit &	to
	)

template<class T >

void biogears::Copy ( const std::vector< T * > &  from, std::vector< T * > &  to  )

inline

template<class T >

void biogears::Copy ( const std::vector< T > &  from, std::vector< T > &  to  )

inline

template<class T >

void biogears::Copy ( const std::vector< T * > &  from, std::vector< const T * > &  to  )

inline

std::unique_ptr< PhysiologyEngine > biogears::CreateBioGearsEngine

(

biogears::Logger *

logger = nullptr

)

std::unique_ptr< PhysiologyEngine > biogears::CreateBioGearsEngine

(

const std::string

logfile = ""

)

std::unique_ptr< PhysiologyEngine > biogears::CreateBioGearsEngine

(

const char *

logfile = ""

)

std::unique_ptr< biogears::PhysiologyEngine > biogears::CreateBioGearsEngine	(	const std::string	working_dir,
		const std::string	logfile
	)

std::unique_ptr< biogears::PhysiologyEngine > biogears::CreateBioGearsEngine	(	const char *	working_dir,
		const char *	logfile
	)

std::unique_ptr< biogears::PhysiologyEngine > biogears::CreateBioGearsEngine	(	const std::string	working_dir,
		biogears::Logger *	logger
	)

std::unique_ptr< biogears::PhysiologyEngine > biogears::CreateBioGearsEngine	(	const char *	working_dir,
		biogears::Logger *	logger
	)

bool biogears::CreateFilePath

(

const std::string &

path

)

bool biogears::CreateFilePath

(

const char *

path

)

template<class T , class K >

void biogears::DELETE_MAP_SECOND ( std::map< T, K > &  map )

inline

template<class T >

void biogears::DELETE_VECTOR ( std::vector< T > &  vec )

inline

void biogears::DeleteDirectory	(	const std::string &	dir,
		bool	bDeleteSubdirectories = true
	)

BIOGEARS_API std::string biogears::full_version_string

(

)

BIOGEARS_API char const* biogears::full_version_string_str

(

)

std::string biogears::GetCurrentWorkingDirectory

(

)

const char * biogears::GetCurrentWorkingDirectory_cStr

(

)

size_t biogears::hash_value ( const CQuantityConversionKey &  ref )

inline

size_t biogears::hash_value ( const CUnitDimension &  ref )

inline

template<class Unit >

void biogears::IncrementOverride ( SEScalarQuantity< Unit > &  s, double  value, const Unit &  unit  )

inline

void biogears::IncrementOverride ( SEScalar &  s, double  value  )

inline

bool biogears::IsAbsolutePath

(

const std::string &

path

)

bool biogears::IsAbsolutePath

(

const char *

path

)

bool BIOGEARS_API biogears::IsDirectory

(

dirent *

ent

)

bool biogears::IsDirectory

(

struct::dirent *

ent

)

void biogears::ListFiles	(	const std::string &	dir,
		std::vector< std::string > &	files,
		const std::string &	mask = "",
		bool	recurse = true
	)

std::vector< std::string > biogears::ListFiles	(	const std::string &	dir,
		const std::string &	regex,
		bool	recurse = true
	)

void biogears::MakeDirectory

(

const std::string &

dir

)

bool biogears::operator!= ( double  lhs, const SEScalar &  rhs  )

inline

template<class T >

bool biogears::operator!=	(	const CPScalar &	lhs,
		const T &	rhs
	)

template<class T >

bool biogears::operator!=	(	const T &	lhs,
		const CPScalar &	rhs
	)

SEScalar biogears::operator* ( double  lhs, const SEScalar &  rhs  )

inline

const CUnitDimension biogears::operator* ( const double &  lhs, const CUnitDimension &  rhs  )

inline

template<class T >

CPScalar biogears::operator*	(	const CPScalar &	lhs,
		const T &	rhs
	)

template<class T >

CPScalar biogears::operator*	(	const T &	lhs,
		const CPScalar &	rhs
	)

template<class T >

CPScalar& biogears::operator*=	(	CPScalar &	lhs,
		const T &	rhs
	)

SEScalar biogears::operator+ ( double  lhs, const SEScalar &  rhs  )

inline

template<class T >

CPScalar biogears::operator+	(	const CPScalar &	lhs,
		const T &	rhs
	)

template<class T >

CPScalar biogears::operator+	(	const T &	lhs,
		const CPScalar &	rhs
	)

SEScalar biogears::operator- ( double  lhs, const SEScalar &  rhs  )

inline

template<class T >

CPScalar biogears::operator-	(	const CPScalar &	lhs,
		const T &	rhs
	)

template<class T >

CPScalar biogears::operator-	(	const T &	lhs,
		const CPScalar &	rhs
	)

SEScalar biogears::operator/ ( double  lhs, const SEScalar &  rhs  )

inline

template<class T >

CPScalar biogears::operator/	(	const CPScalar &	lhs,
		const T &	rhs
	)

template<class T >

CPScalar biogears::operator/	(	const T &	lhs,
		const CPScalar &	rhs
	)

template<class T >

CPScalar& biogears::operator/=	(	CPScalar &	lhs,
		const T &	rhs
	)

bool biogears::operator< ( double  lhs, const SEScalar &  rhs  )

inline

template<class T >

bool biogears::operator<	(	const CPScalar &	lhs,
		const T &	rhs
	)

template<class T >

bool biogears::operator<	(	const T &	lhs,
		const CPScalar &	rhs
	)

std::ostream& biogears::operator<< ( std::ostream &  out, const SEConsciousRespirationCommand &  c  )

inline

std::ostream& biogears::operator<< ( std::ostream &  out, const SECondition &  a  )

inline

std::ostream& biogears::operator<< ( std::ostream &  out, const SEAction &  a  )

inline

std::ostream& biogears::operator<< ( std::ostream &  out, const SENutrition &  n  )

inline

std::ostream& biogears::operator<< ( std::ostream &  out, const SEScalar *  s  )

inline

std::ostream& biogears::operator<< ( std::ostream &  out, const SEScalar &  s  )

inline

std::ostream& biogears::operator<< ( std::ostream &  out, const CCompoundUnit &  ccu  )

inline

std::ostream& biogears::operator<< ( std::ostream &  out, const CCompoundUnit *  ccu  )

inline

std::ostream& biogears::operator<< ( std::ostream &  output, const CPScalar &  self  )

inline

bool biogears::operator<= ( double  lhs, const SEScalar &  rhs  )

inline

template<class T >

bool biogears::operator<=	(	const CPScalar &	lhs,
		const T &	rhs
	)

template<class T >

bool biogears::operator<=	(	const T &	lhs,
		const CPScalar &	rhs
	)

bool biogears::operator== ( double  lhs, const SEScalar &  rhs  )

inline

template<class T >

bool biogears::operator==	(	const CPScalar &	lhs,
		const T &	rhs
	)

template<class T >

bool biogears::operator==	(	const T &	lhs,
		const CPScalar &	rhs
	)

bool biogears::operator> ( double  lhs, const SEScalar &  rhs  )

inline

template<class T >

bool biogears::operator>	(	const CPScalar &	lhs,
		const T &	rhs
	)

template<class T >

bool biogears::operator>	(	const T &	lhs,
		const CPScalar &	rhs
	)

bool biogears::operator>= ( double  lhs, const SEScalar &  rhs  )

inline

template<class T >

bool biogears::operator>=	(	const CPScalar &	lhs,
		const T &	rhs
	)

template<class T >

bool biogears::operator>=	(	const T &	lhs,
		const CPScalar &	rhs
	)

template<class Unit >

void biogears::Override ( const SEScalarQuantity< Unit > &  from, SEScalarQuantity< Unit > &  to  )

inline

void biogears::Override ( const SEScalar &  from, SEScalar &  to  )

inline

CCompoundUnit biogears::pow ( const CCompoundUnit &  baseref, CCompoundUnitElement::ExponentType  exp  )

inline

CPScalar biogears::pow ( const CPScalar &  baseref, double  pwr  )

inline

CPScalar biogears::pow ( const CPScalar &  baseref, int  pwr  )

inline

BIOGEARS_API std::string biogears::project_name

(

)

BIOGEARS_API char const* biogears::project_name_str

(

)

template<class T >

void biogears::Remove ( std::vector< T * > &  v, T *  item  )

inline

std::string biogears::Replace	(	const std::string &	original,
		const std::string &	replace,
		const std::string &	withThis
	)

std::string biogears::ResolvePath

(

const std::string &

path

)

const char * biogears::ResolvePath_cStr

(

const char *

path

)

This call is very unsafe when using threading. The lifetime of the char* returned is until the next call of ResolvePath. Copy this return value immediatly after the call to avoid most issues.

Parameters

const

char* path Path to be resolved

BIOGEARS_API std::string biogears::rev_commit_date

(

)

BIOGEARS_API char const* biogears::rev_commit_date_str

(

)

BIOGEARS_API std::string biogears::rev_hash

(

)

BIOGEARS_API char const* biogears::rev_hash_str

(

)

BIOGEARS_API int biogears::rev_offset

(

)

BIOGEARS_API std::string biogears::rev_tag

(

)

BIOGEARS_API char const* biogears::rev_tag_str

(

)

template<typename valueType >

bool biogears::SameSign	(	valueType	x,
		valueType	y
	)

void biogears::SetCurrentWorkingDirectory

(

std::string

working_dir

)

void biogears::SetCurrentWorkingDirectory

(

const char *

working_dir

)

std::string biogears::Space2Underscore

(

const std::string &

str

)

CCompoundUnit biogears::sqrt ( const CCompoundUnit &  argref )

inline

CPScalar biogears::sqrt ( const CPScalar &  argref )

inline

bool biogears::TestFirstDirName	(	std::string	path,
		std::string	dirname
	)

bool biogears::TestFirstDirName	(	const char *	path,
		const char *	dirname
	)

bool biogears::TestLastDirName	(	std::string	path,
		std::string	dirname
	)

bool biogears::TestLastDirName	(	const char *	path,
		const char *	dirname
	)

double biogears::TotalHbMols	(	SELiquidCompartmentGraph &	Graph,
		SESubstance &	Hb,
		SESubstance &	HbO2,
		SESubstance &	HbO2CO2,
		SESubstance &	HbCO2
	)

template<class Unit >

void biogears::ValueOverride ( SEScalarQuantity< Unit > &  s, double  value, const Unit &  unit  )

inline

void biogears::ValueOverride ( SEScalar &  s, double  value  )

inline

std::chrono::microseconds::rep biogears::vectorAverage

(

std::vector< std::chrono::microseconds::rep > const &

v

)

BIOGEARS_API std::string biogears::version_string

(

)

BIOGEARS_API char const* biogears::version_string_str

(

)

Variable Documentation

std::stringstream biogears::err

static

std::stringstream biogears::err

static

BIOGEARS_API std::recursive_mutex biogears::g_fileSystemMutex

std::string biogears::g_working_dir = ""

constexpr char biogears::idAchievedExerciseLevel[] = "AchievedExerciseLevel"

constexpr char biogears::idAlveolarArterialGradient[] = "AlveolarArterialGradient"

constexpr char biogears::idAntibioticActivity[] = "AntibioticActivity"

constexpr char biogears::idArterialBloodPH[] = "ArterialBloodPH"

constexpr char biogears::idArterialBloodPHBaseline[] = "ArterialBloodPHBaseline"

constexpr char biogears::idArterialCarbonDioxidePressure[] = "ArterialCarbonDioxidePressure"

constexpr char biogears::idArterialOxygenPressure[] = "ArterialOxygenPressure"

constexpr char biogears::idArterialPressure[] = "ArterialPressure"

constexpr char biogears::idAttentionLapses[] = "AttentionLapses"

constexpr char biogears::idAutonomicResponseLevel[] = "AutonomicResponseLevel"

constexpr char biogears::idBiologicalDebt[] = "BiologicalDebt"

constexpr char biogears::idBloodDensity[] = "BloodDensity"

constexpr char biogears::idBloodPathogen[] = "BloodPathogen"

constexpr char biogears::idBloodSpecificHeat[] = "BloodSpecificHeat"

constexpr char biogears::idBloodUreaNitrogenConcentration[] = "BloodUreaNitrogenConcentration"

constexpr char biogears::idBloodVolume[] = "BloodVolume"

constexpr char biogears::idBronchodilationLevel[] = "BronchodilationLevel"

constexpr char biogears::idCarbonDioxideProductionRate[] = "CarbonDioxideProductionRate"

constexpr char biogears::idCarbonDioxideSaturation[] = "CarbonDioxideSaturation"

constexpr char biogears::idCarbonMonoxideSaturation[] = "CarbonMonoxideSaturation"

constexpr char biogears::idCardiacIndex[] = "CardiacIndex"

constexpr char biogears::idCardiacOutput[] = "CardiacOutput"

constexpr char biogears::idCarricoIndex[] = "CarricoIndex"

constexpr char biogears::idCatecholamines[] = "Catecholamines"

constexpr char biogears::idCentralNervousResponse[] = "CentralNervousResponse"

constexpr char biogears::idCentralVenousPressure[] = "CentralVenousPressure"

constexpr char biogears::idCerebralBloodFlow[] = "CerebralBloodFlow"

constexpr char biogears::idCerebralPerfusionPressure[] = "CerebralPerfusionPressure"

constexpr char biogears::idChlorideLostToSweat[] = "ChlorideLostToSweat"

constexpr char biogears::idChymeAbsorptionRate[] = "ChymeAbsorptionRate"

constexpr char biogears::idComplianceScale[] = "ComplianceScale"

constexpr char biogears::idConstitutiveNOS[] = "ConstitutiveNOS"

constexpr char biogears::idCoreTemperature[] = "CoreTemperature"

constexpr char biogears::idCreatinineProductionRate[] = "CreatinineProductionRate"

constexpr char biogears::idDehydrationFraction[] = "DehydrationFraction"

constexpr char biogears::idDiastolicArterialPressure[] = "DiastolicArterialPressure"

constexpr char biogears::idEndTidalCarbonDioxideFraction[] = "EndTidalCarbonDioxideFraction"

constexpr char biogears::idEndTidalCarbonDioxidePressure[] = "EndTidalCarbonDioxidePressure"

constexpr char biogears::idEnergyDeficit[] = "EnergyDeficit"

constexpr char biogears::idExerciseEnergyDemand[] = "ExerciseEnergyDemand"

constexpr char biogears::idExerciseMeanArterialPressureDelta[] = "ExerciseMeanArterialPressureDelta"

constexpr char biogears::idExpiratoryFlow[] = "ExpiratoryFlow"

constexpr char biogears::idExtracellularFluidVolume[] = "ExtracellularFluidVolume"

constexpr char biogears::idExtravascularFluidVolume[] = "ExtravascularFluidVolume"

constexpr char biogears::idFatGlucagonSetPoint[] = "FatGlucagonSetPoint"

constexpr char biogears::idFatigueLevel[] = "FatigueLevel"

constexpr char biogears::idFatInsulinSetPoint[] = "FatInsulinSetPoint"

constexpr char biogears::idFeverChange[] = "FeverChange"

constexpr char biogears::idFiltrationFraction[] = "FiltrationFraction"

constexpr char biogears::idGlomerularFiltrationRate[] = "GlomerularFiltrationRate"

constexpr char biogears::idGlucagonSynthesisRate[] = "GlucagonSynthesisRate"

constexpr char biogears::idHeartEjectionFraction[] = "HeartEjectionFraction"

constexpr char biogears::idHeartElastanceScale[] = "HeartElastanceScale"

constexpr char biogears::idHeartRate[] = "HeartRate"

constexpr char biogears::idHeartRateChange[] = "HeartRateChange"

constexpr char biogears::idHeartRateScale[] = "HeartRateScale"

constexpr char biogears::idHeartStrokeVolume[] = "HeartStrokeVolume"

constexpr char biogears::idHematocrit[] = "Hematocrit"

constexpr char biogears::idHemoglobinContent[] = "HemoglobinContent"

constexpr char biogears::idHemoglobinLostToUrine[] = "HemoglobinLostToUrine"

constexpr char biogears::idHemorrhageChange[] = "HemorrhageChange"

constexpr char biogears::idHepaticGluconeogenesisRate[] = "HepaticGluconeogenesisRate"

constexpr char biogears::idInducibleNOS[] = "InducibleNOS"

constexpr char biogears::idInducibleNOSPre[] = "InducibleNOSPre"

constexpr char biogears::idInflammationTime[] = "InflammationTime"

constexpr char biogears::idInflammtoryRespone[] = "InflammatoryResponse"

constexpr char biogears::idInspiratoryExpiratoryRatio[] = "InspiratoryExpiratoryRatio"

constexpr char biogears::idInspiratoryFlow[] = "InspiratoryFlow"

constexpr char biogears::idInsulinSynthesisRate[] = "InsulinSynthesisRate"

constexpr char biogears::idInterleukin10[] = "Interleukin10"

constexpr char biogears::idInterleukin12[] = "Interleukin12"

constexpr char biogears::idInterleukin6[] = "Interleukin6"

constexpr char biogears::idIntracellularFluidPH[] = "IntracellularFluidPH"

constexpr char biogears::idIntracellularFluidVolume[] = "IntracellularFluidVolume"

constexpr char biogears::idIntracranialPressure[] = "IntracranialPressure"

constexpr char biogears::idKetoneProductionRate[] = "KetoneProductionRate"

constexpr char biogears::idLactateProductionRate[] = "LactateProductionRate"

constexpr char biogears::idLeftAfferentArterioleResistance[] = "LeftAfferentArterioleResistance"

constexpr char biogears::idLeftBowmansCapsulesHydrostaticPressure[] = "LeftBowmansCapsulesHydrostaticPressure"

constexpr char biogears::idLeftBowmansCapsulesOsmoticPressure[] = "LeftBowmansCapsulesOsmoticPressure"

constexpr char biogears::idLeftEfferentArterioleResistance[] = "LeftEfferentArterioleResistance"

constexpr char biogears::idLeftEyePupillaryResponse[] = "LeftEyePupillaryResponse"

constexpr char biogears::idLeftFiltrationFraction[] = "LeftFiltrationFraction"

constexpr char biogears::idLeftGlomerularCapillariesHydrostaticPressure[] = "LeftGlomerularCapillariesHydrostaticPressure"

constexpr char biogears::idLeftGlomerularCapillariesOsmoticPressure[] = "LeftGlomerularCapillariesOsmoticPressure"

constexpr char biogears::idLeftGlomerularFiltrationCoefficient[] = "LeftGlomerularFiltrationCoefficient"

constexpr char biogears::idLeftGlomerularFiltrationRate[] = "LeftGlomerularFiltrationRate"

constexpr char biogears::idLeftGlomerularFiltrationSurfaceArea[] = "LeftGlomerularFiltrationSurfaceArea"

constexpr char biogears::idLeftGlomerularFluidPermeability[] = "LeftGlomerularFluidPermeability"

constexpr char biogears::idLeftNetFiltrationPressure[] = "LeftNetFiltrationPressure"

constexpr char biogears::idLeftNetReabsorptionPressure[] = "LeftNetReabsorptionPressure"

constexpr char biogears::idLeftPeritubularCapillariesHydrostaticPressure[] = "LeftPeritubularCapillariesHydrostaticPressure"

constexpr char biogears::idLeftPeritubularCapillariesOsmoticPressure[] = "LeftPeritubularCapillariesOsmoticPressure"

constexpr char biogears::idLeftReabsorptionFiltrationCoefficient[] = "LeftReabsorptionFiltrationCoefficient"

constexpr char biogears::idLeftReabsorptionRate[] = "LeftReabsorptionRate"

constexpr char biogears::idLeftTubularHydrostaticPressure[] = "LeftTubularHydrostaticPressure"

constexpr char biogears::idLeftTubularOsmoticPressure[] = "LeftTubularOsmoticPressure"

constexpr char biogears::idLeftTubularReabsorptionFiltrationSurfaceArea[] = "LeftTubularReabsorptionFiltrationSurfaceArea"

constexpr char biogears::idLeftTubularReabsorptionFluidPermeability[] = "LeftTubularReabsorptionFluidPermeability"

constexpr char biogears::idLiverGlucagonSetPoint[] = "LiverGlucagonSetPoint"

constexpr char biogears::idLiverGlycogen[] = "LiverGlycogen"

constexpr char biogears::idLiverInsulinSetPoint[] = "LiverInsulinSetPoint"

constexpr char biogears::idLocalBarrier[] = "LocalBarrier"

constexpr char biogears::idLocalMacrophage[] = "LocalMacrophage"

constexpr char biogears::idLocalNeutrophil[] = "LocalNeutrophil"

constexpr char biogears::idLocalPathogen[] = "LocalPathogen"

constexpr char biogears::idMacrophageActive[] = "MacrophageActive"

constexpr char biogears::idMacrophageResting[] = "MacrophageResting"

constexpr char biogears::idMeanArterialCarbonDioxidePartialPressure[] = "MeanArterialCarbonDioxidePartialPressure"

constexpr char biogears::idMeanArterialCarbonDioxidePartialPressureDelta[] = "MeanArterialCarbonDioxidePartialPressureDelta"

constexpr char biogears::idMeanArterialPressure[] = "MeanArterialPressure"

constexpr char biogears::idMeanBloodPressureChange[] = "MeanBloodPressureChange"

constexpr char biogears::idMeanCentralVenousPressure[] = "MeanCentralVenousPressure"

constexpr char biogears::idMeanPleuralPressure[] = "MeanPleuralPressure"

constexpr char biogears::idMeanSkinFlow[] = "MeanSkinFlow"

constexpr char biogears::idMeanUrineOutput[] = "MeanUrineOutput"

constexpr char biogears::idMuscleGlucagonSetPoint[] = "MuscleGlucagonSetPoint"

constexpr char biogears::idMuscleGlycogen[] = "MuscleGlycogen"

constexpr char biogears::idMuscleInsulinSetPoint[] = "MuscleInsulinSetPoint"

constexpr char biogears::idNeuromuscularBlockLevel[] = "NeuromuscularBlockLevel"

constexpr char biogears::idNeutrophilActive[] = "NeutrophilActive"

constexpr char biogears::idNeutrophilResting[] = "NeutrophilResting"

constexpr char biogears::idNitrate[] = "Nitrate"

constexpr char biogears::idNitricOxide[] = "NitricOxide"

constexpr char biogears::idOxygenConsumptionRate[] = "OxygenConsumptionRate"

constexpr char biogears::idOxygenSaturation[] = "OxygenSaturation"

constexpr char biogears::idOxygenVenousSaturation[] = "OxygenVenousSaturation"

constexpr char biogears::idPainToleranceChange[] = "PainToleranceChange"

constexpr char biogears::idPainVisualAnalogueScale[] = "PainVisualAnalogueScale"

constexpr char biogears::idPhosphate[] = "Phosphate"

constexpr char biogears::idPlasmaVolume[] = "PlasmaVolume"

constexpr char biogears::idPotassiumLostToSweat[] = "PotassiumLostToSweat"

constexpr char biogears::idPulmonaryArterialCarbonDioxidePressure[] = "PulmonaryArterialCarbonDioxidePressure"

constexpr char biogears::idPulmonaryArterialOxygenPressure[] = "PulmonaryArterialOxygenPressure"

constexpr char biogears::idPulmonaryArterialPressure[] = "PulmonaryArterialPressure"

constexpr char biogears::idPulmonaryCapillariesWedgePressure[] = "PulmonaryCapillariesWedgePressure"

constexpr char biogears::idPulmonaryCompliance[] = "PulmonaryCompliance"

constexpr char biogears::idPulmonaryDiastolicArterialPressure[] = "PulmonaryDiastolicArterialPressure"

constexpr char biogears::idPulmonaryMeanArterialPressure[] = "PulmonaryMeanArterialPressure"

constexpr char biogears::idPulmonaryMeanCapillaryFlow[] = "PulmonaryMeanCapillaryFlow"

constexpr char biogears::idPulmonaryMeanShuntFlow[] = "PulmonaryMeanShuntFlow"

constexpr char biogears::idPulmonaryResistance[] = "PulmonaryResistance"

constexpr char biogears::idPulmonarySystolicArterialPressure[] = "PulmonarySystolicArterialPressure"

constexpr char biogears::idPulmonaryVascularResistance[] = "PulmonaryVascularResistance"

constexpr char biogears::idPulmonaryVascularResistanceIndex[] = "PulmonaryVascularResistanceIndex"

constexpr char biogears::idPulmonaryVenousCarbonDioxidePressure[] = "PulmonaryVenousCarbonDioxidePressure"

constexpr char biogears::idPulmonaryVenousOxygenPressure[] = "PulmonaryVenousOxygenPressure"

constexpr char biogears::idPulseOximetry[] = "PulseOximetry"

constexpr char biogears::idPulsePressure[] = "PulsePressure"

constexpr char biogears::idPulsePressureChange[] = "PulsePressureChange"

constexpr char biogears::idPupillaryResponse[] = "PupillaryResponse"

constexpr char biogears::idReactionTime[] = "ReactionTime"

constexpr char biogears::idRedBloodCellAcetylcholinesterase[] = "RedBloodCellAcetylcholinesterase"

constexpr char biogears::idRedBloodCellCount[] = "RedBloodCellCount"

constexpr char biogears::idRenalBloodFlow[] = "RenalBloodFlow"

constexpr char biogears::idRenalPlasmaFlow[] = "RenalPlasmaFlow"

constexpr char biogears::idRenalVascularResistance[] = "RenalVascularResistance"

constexpr char biogears::idResistanceScaleExtrasplanchnic[] = "ResistanceScaleExtrasplanchnic"

constexpr char biogears::idResistanceScaleMuscle[] = "ResistanceScaleMuscle"

constexpr char biogears::idResistanceScaleMyocardium[] = "ResistanceScaleMyocardium"

constexpr char biogears::idResistanceScaleSplanchnic[] = "ResistanceScaleSplanchnic"

constexpr char biogears::idRespirationDriverFrequency[] = "RespirationDriverFrequency"

constexpr char biogears::idRespirationDriverPressure[] = "RespirationDriverPressure"

constexpr char biogears::idRespirationMusclePressure[] = "RespirationMusclePressure"

constexpr char biogears::idRespirationRate[] = "RespirationRate"

constexpr char biogears::idRespirationRateChange[] = "RespirationRateChange"

constexpr char biogears::idRespiratoryExchangeRatio[] = "RespiratoryExchangeRatio"

constexpr char biogears::idRhTransfusionReactionVolume[] = "RhTransfusionReactionVolume"

constexpr char biogears::idRichmondAgitationSedationScale[] = "RichmondAgitationSedationScale"

constexpr char biogears::idRightAfferentArterioleResistance[] = "RightAfferentArterioleResistance"

constexpr char biogears::idRightBowmansCapsulesHydrostaticPressure[] = "RightBowmansCapsulesHydrostaticPressure"

constexpr char biogears::idRightBowmansCapsulesOsmoticPressure[] = "RightBowmansCapsulesOsmoticPressure"

constexpr char biogears::idRightEfferentArterioleResistance[] = "RightEfferentArterioleResistance"

constexpr char biogears::idRightEyePupillaryResponse[] = "RightEyePupillaryResponse"

constexpr char biogears::idRightFiltrationFraction[] = "RightFiltrationFraction"

constexpr char biogears::idRightGlomerularCapillariesHydrostaticPressure[] = "RightGlomerularCapillariesHydrostaticPressure"

constexpr char biogears::idRightGlomerularCapillariesOsmoticPressure[] = "RightGlomerularCapillariesOsmoticPressure"

constexpr char biogears::idRightGlomerularFiltrationCoefficient[] = "RightGlomerularFiltrationCoefficient"

constexpr char biogears::idRightGlomerularFiltrationRate[] = "RightGlomerularFiltrationRate"

constexpr char biogears::idRightGlomerularFiltrationSurfaceArea[] = "RightGlomerularFiltrationSurfaceArea"

constexpr char biogears::idRightGlomerularFluidPermeability[] = "RightGlomerularFluidPermeability"

constexpr char biogears::idRightNetFiltrationPressure[] = "RightNetFiltrationPressure"

constexpr char biogears::idRightNetReabsorptionPressure[] = "RightNetReabsorptionPressure"

constexpr char biogears::idRightPeritubularCapillariesHydrostaticPressure[] = "RightPeritubularCapillariesHydrostaticPressure"

constexpr char biogears::idRightPeritubularCapillariesOsmoticPressure[] = "RightPeritubularCapillariesOsmoticPressure"

constexpr char biogears::idRightReabsorptionFiltrationCoefficient[] = "RightReabsorptionFiltrationCoefficient"

constexpr char biogears::idRightReabsorptionRate[] = "RightReabsorptionRate"

constexpr char biogears::idRightTubularHydrostaticPressure[] = "RightTubularHydrostaticPressure"

constexpr char biogears::idRightTubularOsmoticPressure[] = "RightTubularOsmoticPressure"

constexpr char biogears::idRightTubularReabsorptionFiltrationSurfaceArea[] = "RightTubularReabsorptionFiltrationSurfaceArea"

constexpr char biogears::idRightTubularReabsorptionFluidPermeability[] = "RightTubularReabsorptionFluidPermeability"

constexpr char biogears::idSedationLevel[] = "SedationLevel"

constexpr char biogears::idShuntFraction[] = "ShuntFraction"

constexpr char biogears::idSkinTemperature[] = "SkinTemperature"

constexpr char biogears::idSleepTime[] = "SleepTime"

constexpr char biogears::idSodiumLostToSweat[] = "SodiumLostToSweat"

constexpr char biogears::idSpecificVentilation[] = "SpecificVentilation"

constexpr char biogears::idStomachContents[] = "StomachContents"

constexpr char biogears::idStoredFat[] = "StoredFat"

constexpr char biogears::idStoredProtein[] = "StoredProtein"

constexpr char biogears::idStrongIonDifference[] = "StrongIonDifference"

constexpr char biogears::idSweatRate[] = "SweatRate"

constexpr char biogears::idSystemicVascularResistance[] = "SystemicVascularResistance"

constexpr char biogears::idSystolicArterialPressure[] = "SystolicArterialPressure"

constexpr char biogears::idTargetPulmonaryVentilation[] = "TargetPulmonaryVentilation"

constexpr char biogears::idTidalVolume[] = "TidalVolume"

constexpr char biogears::idTidalVolumeChange[] = "TidalVolumeChange"

constexpr char biogears::idTissueIntegrity[] = "TissueIntegrity"

constexpr char biogears::idTotalAlveolarVentilation[] = "TotalAlveolarVentilation"

constexpr char biogears::idTotalBilirubin[] = "TotalBilirubin"

constexpr char biogears::idTotalBodyFluidVolume[] = "TotalBodyFluidVolume"

constexpr char biogears::idTotalDeadSpaceVentilation[] = "TotalDeadSpaceVentilation"

constexpr char biogears::idTotalLungVolume[] = "TotalLungVolume"

constexpr char biogears::idTotalMetabolicRate[] = "TotalMetabolicRate"

constexpr char biogears::idTotalProteinConcentration[] = "TotalProteinConcentration"

constexpr char biogears::idTotalPulmonaryVentilation[] = "TotalPulmonaryVentilation"

constexpr char biogears::idTotalWorkRateLevel[] = "TotalWorkRateLevel"

constexpr char biogears::idTranspulmonaryPressure[] = "TranspulmonaryPressure"

constexpr char biogears::idTrauma[] = "Trauma"

constexpr char biogears::idTubularPermeabilityChange[] = "TubularPermeabilityChange"

constexpr char biogears::idTumorNecrosisFactor[] = "TumorNecrosisFactor"

constexpr char biogears::idUrinationRate[] = "UrinationRate"

constexpr char biogears::idUrineOsmolality[] = "UrineOsmolality"

constexpr char biogears::idUrineOsmolarity[] = "UrineOsmolarity"

constexpr char biogears::idUrineProductionRate[] = "UrineProductionRate"

constexpr char biogears::idUrineSpecificGravity[] = "UrineSpecificGravity"

constexpr char biogears::idUrineUreaNitrogenConcentration[] = "UrineUreaNitrogenConcentration"

constexpr char biogears::idUrineVolume[] = "UrineVolume"

constexpr char biogears::idVenousBloodPH[] = "VenousBloodPH"

constexpr char biogears::idVenousCarbonDioxidePressure[] = "VenousCarbonDioxidePressure"

constexpr char biogears::idVenousOxygenPressure[] = "VenousOxygenPressure"

constexpr char biogears::idVolumeFractionNeutralLipidInPlasma[] = "VolumeFractionNeutralLipidInPlasma"

constexpr char biogears::idVolumeFractionNeutralPhospholipidInPlasma[] = "VolumeFractionNeutralPhospholipidInPlasma"

constexpr char biogears::idWakeTime[] = "WakeTime"

constexpr char biogears::idWhiteBloodCellCount[] = "WhiteBloodCellCount"

constexpr const char* biogears::UCEDEFS_TEXT

const std::string biogears::unitless = "unitless"

constexpr double biogears::ZERO_APPROX = 1e-10

static