Manages all compartments and graphs associated with all BioGears systems/equipement. More...

#include <BioGearsCompartments.h>

Inheritance diagram for biogears::BioGearsCompartments:

Public Member Functions
	BioGearsCompartments (BioGears &data)

virtual	~BioGearsCompartments ()

void	Clear ()

virtual bool	Load (const CDM::CompartmentManagerData &in, SECircuitManager *circuits=nullptr)

void	StateChange ()

void	UpdateAirwayGraph ()

SELiquidCompartmentGraph &	GetActiveCardiovascularGraph ()

SELiquidCompartmentGraph &	GetCardiovascularGraph ()

SELiquidCompartmentGraph &	GetCerebralGraph ()

SELiquidCompartmentGraph &	GetRenalGraph ()

SEGasCompartmentGraph &	GetActiveRespiratoryGraph ()

SEGasCompartmentGraph &	GetRespiratoryGraph ()

SEGasCompartmentGraph &	GetRespiratoryAndAnesthesiaMachineGraph ()

SEGasCompartmentGraph &	GetRespiratoryAndInhalerGraph ()

SEGasCompartmentGraph &	GetRespiratoryAndMechanicalVentilatorGraph ()

SEGasCompartmentGraph &	GetAnesthesiaMachineGraph ()

SELiquidCompartmentGraph &	GetActiveAerosolGraph ()

SELiquidCompartmentGraph &	GetAerosolGraph ()

SELiquidCompartmentGraph &	GetAerosolAndInhalerGraph ()

const std::vector< SELiquidCompartment * > &	GetAerosolCompartments ()

const std::vector< SELiquidCompartment * > &	GetAerosolLeafCompartments ()

const std::vector< SELiquidCompartment * > &	GetChymeCompartments ()

const std::vector< SELiquidCompartment * > &	GetChymeLeafCompartments ()

const std::vector< SEGasCompartment * > &	GetPulmonaryCompartments ()

const std::vector< SEGasCompartment * > &	GetPulmonaryLeafCompartments ()

const std::vector< SEThermalCompartment * > &	GetTemperatureCompartments ()

const std::vector< SEThermalCompartment * > &	GetTemperatureLeafCompartments ()

const std::vector< SETissueCompartment * > &	GetTissueCompartments ()

const std::vector< SETissueCompartment * > &	GetTissueLeafCompartments ()

const std::vector< SELiquidCompartment * > &	GetUrineCompartments ()

const std::vector< SELiquidCompartment * > &	GetUrineLeafCompartments ()

const std::vector< SELiquidCompartment * > &	GetVascularCompartments ()

const std::vector< SELiquidCompartment * > &	GetVascularLeafCompartments ()

const std::vector< SEGasCompartment * > &	GetAnesthesiaMachineCompartments ()

const std::vector< SEGasCompartment * > &	GetAnesthesiaMachineLeafCompartments ()

const std::vector< SEGasCompartment * > &	GetInhalerCompartments ()

const std::vector< SEGasCompartment * > &	GetInhalerLeafCompartments ()

const std::vector< SELiquidCompartment * > &	GetInhalerAerosolCompartments ()

const std::vector< SELiquidCompartment * > &	GetInhalerAerosolLeafCompartments ()

const std::vector< SEGasCompartment * > &	GetMechanicalVentilatorCompartments ()

const std::vector< SEGasCompartment * > &	GetMechanicalVentilatorLeafCompartments ()

SELiquidCompartment &	GetExtracellularFluid (SETissueCompartment &t)

SELiquidCompartment &	GetIntracellularFluid (SETissueCompartment &t)

const std::map< SETissueCompartment , SELiquidCompartment > &	GetExtracellularFluid ()

const std::map< SETissueCompartment , SELiquidCompartment > &	GetIntracellularFluid ()

Public Member Functions inherited from biogears::SECompartmentManager
	SECompartmentManager (SESubstanceManager &subMgr)

virtual	~SECompartmentManager ()

virtual CDM::CompartmentManagerData *	Unload () const

virtual void	UpdateLinks ()

virtual void	UpdateLinks (SEGasCompartmentGraph &graph)

virtual void	UpdateLinks (SELiquidCompartmentGraph &graph)

virtual bool	HasCompartment (CDM::enumCompartmentType::value type, const char *name) const

virtual bool	HasCompartment (CDM::enumCompartmentType::value type, const std::string &name) const

virtual SECompartment *	GetCompartment (CDM::enumCompartmentType::value type, const char *name)

virtual SECompartment *	GetCompartment (CDM::enumCompartmentType::value type, const std::string &name)

virtual const SECompartment *	GetCompartment (CDM::enumCompartmentType::value type, const char *name) const

virtual const SECompartment *	GetCompartment (CDM::enumCompartmentType::value type, const std::string &name) const

virtual SEGasCompartment &	CreateGasCompartment (const char *name)

virtual SEGasCompartment &	CreateGasCompartment (const std::string &name)

virtual void	DeleteGasCompartment (const char *name)

virtual void	DeleteGasCompartment (const std::string &name)

virtual bool	HasGasCompartment (const char *name) const

virtual bool	HasGasCompartment (const std::string &name) const

virtual SEGasCompartment *	GetGasCompartment (const char *name)

virtual SEGasCompartment *	GetGasCompartment (const std::string &name)

virtual const SEGasCompartment *	GetGasCompartment (const char *name) const

virtual const SEGasCompartment *	GetGasCompartment (const std::string &name) const

virtual const std::vector< SEGasCompartment * > &	GetGasCompartments ()

virtual const std::vector< SEGasCompartment * > &	GetGasLeafCompartments ()

virtual SEGasCompartmentLink &	CreateGasLink (SEGasCompartment &src, SEGasCompartment &tgt, const char *name)

virtual SEGasCompartmentLink &	CreateGasLink (SEGasCompartment &src, SEGasCompartment &tgt, const std::string &name)

virtual void	DeleteGasLink (const char *name)

virtual void	DeleteGasLink (const std::string &name)

virtual bool	HasGasLink (const char *name) const

virtual bool	HasGasLink (const std::string &name) const

virtual SEGasCompartmentLink *	GetGasLink (const char *name)

virtual SEGasCompartmentLink *	GetGasLink (const std::string &name)

virtual const SEGasCompartmentLink *	GetGasLink (const char *name) const

virtual const SEGasCompartmentLink *	GetGasLink (const std::string &name) const

virtual const std::vector< SEGasCompartmentLink * > &	GetGasLinks ()

virtual SEGasCompartmentGraph &	CreateGasGraph (const char *name)

virtual SEGasCompartmentGraph &	CreateGasGraph (const std::string &name)

virtual void	DeleteGasGraph (const char *name)

virtual void	DeleteGasGraph (const std::string &name)

virtual bool	HasGasGraph (const char *name) const

virtual bool	HasGasGraph (const std::string &name) const

virtual SEGasCompartmentGraph *	GetGasGraph (const char *name)

virtual SEGasCompartmentGraph *	GetGasGraph (const std::string &name)

virtual const SEGasCompartmentGraph *	GetGasGraph (const char *name) const

virtual const SEGasCompartmentGraph *	GetGasGraph (const std::string &name) const

virtual const std::vector< SEGasCompartmentGraph * > &	GetGasGraphs ()

virtual const std::vector< SESubstance * > &	GetGasCompartmentSubstances () const

virtual SELiquidCompartment &	CreateLiquidCompartment (const char *name)

virtual SELiquidCompartment &	CreateLiquidCompartment (const std::string &name)

virtual void	DeleteLiquidCompartment (const char *name)

virtual void	DeleteLiquidCompartment (const std::string &name)

virtual bool	HasLiquidCompartment (const char *name) const

virtual bool	HasLiquidCompartment (const std::string &name) const

virtual SELiquidCompartment *	GetLiquidCompartment (const char *name)

virtual SELiquidCompartment *	GetLiquidCompartment (const std::string &name)

virtual const SELiquidCompartment *	GetLiquidCompartment (const char *name) const

virtual const SELiquidCompartment *	GetLiquidCompartment (const std::string &name) const

virtual const std::vector< SELiquidCompartment * > &	GetLiquidCompartments ()

virtual const std::vector< SELiquidCompartment * > &	GetLiquidLeafCompartments ()

virtual SELiquidCompartmentLink &	CreateLiquidLink (SELiquidCompartment &src, SELiquidCompartment &tgt, const char *name)

virtual SELiquidCompartmentLink &	CreateLiquidLink (SELiquidCompartment &src, SELiquidCompartment &tgt, const std::string &name)

virtual void	DeleteLiquidLink (const char *name)

virtual void	DeleteLiquidLink (const std::string &name)

virtual bool	HasLiquidLink (const char *name) const

virtual bool	HasLiquidLink (const std::string &name) const

virtual SELiquidCompartmentLink *	GetLiquidLink (const char *name)

virtual SELiquidCompartmentLink *	GetLiquidLink (const std::string &name)

virtual const SELiquidCompartmentLink *	GetLiquidLink (const char *name) const

virtual const SELiquidCompartmentLink *	GetLiquidLink (const std::string &name) const

virtual const std::vector< SELiquidCompartmentLink * > &	GetLiquidLinks ()

virtual SELiquidCompartmentGraph &	CreateLiquidGraph (const char *name)

virtual SELiquidCompartmentGraph &	CreateLiquidGraph (const std::string &name)

virtual void	DeleteLiquidGraph (const char *name)

virtual void	DeleteLiquidGraph (const std::string &name)

virtual bool	HasLiquidGraph (const char *name) const

virtual bool	HasLiquidGraph (const std::string &name) const

virtual SELiquidCompartmentGraph *	GetLiquidGraph (const char *name)

virtual SELiquidCompartmentGraph *	GetLiquidGraph (const std::string &name)

virtual const SELiquidCompartmentGraph *	GetLiquidGraph (const char *name) const

virtual const SELiquidCompartmentGraph *	GetLiquidGraph (const std::string &name) const

virtual const std::vector< SELiquidCompartmentGraph * > &	GetLiquidGraphs ()

virtual const std::vector< SESubstance * > &	GetLiquidCompartmentSubstances () const

virtual SEThermalCompartment &	CreateThermalCompartment (const char *name)

virtual SEThermalCompartment &	CreateThermalCompartment (const std::string &name)

virtual void	DeleteThermalCompartment (const char *name)

virtual void	DeleteThermalCompartment (const std::string &name)

virtual bool	HasThermalCompartment (const char *name) const

virtual bool	HasThermalCompartment (const std::string &name) const

virtual SEThermalCompartment *	GetThermalCompartment (const char *name)

virtual SEThermalCompartment *	GetThermalCompartment (const std::string &name)

virtual const SEThermalCompartment *	GetThermalCompartment (const char *name) const

virtual const SEThermalCompartment *	GetThermalCompartment (const std::string &name) const

virtual const std::vector< SEThermalCompartment * > &	GetThermalCompartments ()

virtual const std::vector< SEThermalCompartment * > &	GetThermalLeafCompartments ()

virtual SEThermalCompartmentLink &	CreateThermalLink (SEThermalCompartment &src, SEThermalCompartment &tgt, const char *name)

virtual SEThermalCompartmentLink &	CreateThermalLink (SEThermalCompartment &src, SEThermalCompartment &tgt, const std::string &name)

virtual void	DeleteThermalLink (const char *name)

virtual void	DeleteThermalLink (const std::string &name)

virtual bool	HasThermalLink (const char *name) const

virtual bool	HasThermalLink (const std::string &name) const

virtual SEThermalCompartmentLink *	GetThermalLink (const char *name)

virtual SEThermalCompartmentLink *	GetThermalLink (const std::string &name)

virtual const SEThermalCompartmentLink *	GetThermalLink (const char *name) const

virtual const SEThermalCompartmentLink *	GetThermalLink (const std::string &name) const

virtual const std::vector< SEThermalCompartmentLink * > &	GetThermalLinks ()

virtual bool	HasTissueCompartment (const char *name) const

virtual bool	HasTissueCompartment (const std::string &name) const

virtual void	DeleteTissueCompartment (const char *name)

virtual void	DeleteTissueCompartment (const std::string &name)

virtual SETissueCompartment &	CreateTissueCompartment (const char *name)

virtual SETissueCompartment &	CreateTissueCompartment (const std::string &name)

virtual SETissueCompartment *	GetTissueCompartment (const char *name)

virtual SETissueCompartment *	GetTissueCompartment (const std::string &name)

virtual const SETissueCompartment *	GetTissueCompartment (const char *name) const

virtual const SETissueCompartment *	GetTissueCompartment (const std::string &name) const

Public Member Functions inherited from biogears::Loggable
	Loggable ()

	Loggable (Logger *log)

virtual	~Loggable ()

virtual Logger *	GetLogger () const

Static Public Member Functions
static auto	make_unique (BioGears &bg) -> std::unique_ptr< BioGearsCompartments >

Protected Member Functions
virtual void	AddGasCompartmentSubstance (SESubstance &sub)

virtual void	AddLiquidCompartmentSubstance (SESubstance &sub)

virtual bool	AllowGasSubstance (SESubstance &s, SEGasCompartment &cmpt) const

virtual bool	AllowLiquidSubstance (SESubstance &s, SELiquidCompartment &cmpt) const

Protected Member Functions inherited from biogears::SECompartmentManager
void	Unload (CDM::CompartmentManagerData &data) const

template<typename CompartmentType , typename LinkType >
void	UpdateLinks (const std::vector< CompartmentType * > &compartments, const std::vector< LinkType * > &links) const

template<typename CompartmentType , typename LinkType >
void	GetChildLinks (CompartmentType pnt, CompartmentType child) const

template<typename CompartmentType >
void	FindLeaves (CompartmentType cmpt, std::vector< CompartmentType > &leaves) const

template<typename CompartmentType >
CompartmentType &	CreateCompartment (const std::string &name, std::map< std::string, CompartmentType * > &name2cmpt, std::vector< SESubstance * > *substances)

template<typename CompartmentType >
bool	HasCompartment (const std::string &name, const std::map< std::string, CompartmentType * > &name2cmpt) const

template<typename CompartmentType >
CompartmentType *	GetCompartment (const std::string &name, std::map< std::string, CompartmentType * > &name2cmpt) const

template<typename CompartmentType >
const CompartmentType *	GetCompartment (const std::string &name, const std::map< std::string, CompartmentType * > &name2cmpt) const

template<typename LinkType , typename CompartmentType >
LinkType &	CreateLink (CompartmentType &src, CompartmentType &tgt, const std::string &name, std::map< std::string, LinkType * > &name2link) const

template<typename LinkType >
bool	HasLink (const std::string &name, const std::map< std::string, LinkType * > &name2link) const

template<typename LinkType >
LinkType *	GetLink (const std::string &name, std::map< std::string, LinkType * > &name2link) const

template<typename LinkType >
const LinkType *	GetLink (const std::string &name, const std::map< std::string, LinkType * > &name2link) const

template<typename CompartmentType >
void	SetSubstances (CompartmentType &cmpt, std::vector< SESubstance * > &substances) const

template<typename CompartmentType >
void	AddSubstance (SESubstance &s, CompartmentType &cmpt) const

Protected Member Functions inherited from biogears::Loggable
virtual void	Debug (const char msg, const char origin="") const

virtual void	Debug (const std::string &msg, const std::string &origin=empty) const

virtual void	Debug (std::ostream &msg, const std::string &origin=empty) const

virtual void	Info (const char msg, const char origin="") const

virtual void	Info (const std::string &msg, const std::string &origin=empty) const

virtual void	Info (std::ostream &msg, const std::string &origin=empty) const

virtual void	Warning (const char msg, const char origin="") const

virtual void	Warning (const std::string &msg, const std::string &origin=empty) const

virtual void	Warning (std::ostream &msg, const std::string &origin=empty) const

virtual void	Error (const char msg, const char origin="") const

virtual void	Error (const std::string msg, const std::string origin=empty) const

virtual void	Error (std::ostream &msg, const std::string &origin=empty) const

virtual void	Fatal (const char msg, const char origin="") const

virtual void	Fatal (const std::string &msg, const std::string &origin=empty) const

virtual void	Fatal (std::ostream &msg, const std::string &origin=empty) const

Protected Attributes
BioGears &	m_data

bool	m_UpdateActiveAirwayGraph

bool	m_UpdateActiveAerosolGraph

SELiquidCompartmentGraph *	m_CombinedCardiovascularGraph

SELiquidCompartmentGraph *	m_CardiovascularGraph

SELiquidCompartmentGraph *	m_CerebralGraph

SELiquidCompartmentGraph *	m_RenalGraph

SEGasCompartmentGraph *	m_RespiratoryGraph

SEGasCompartmentGraph *	m_CombinedRespiratoryAnesthesiaGraph

SEGasCompartmentGraph *	m_CombinedRespiratoryInhalerGraph

SEGasCompartmentGraph *	m_CombinedRespiratoryMechanicalVentilatorGraph

SEGasCompartmentGraph *	m_AnesthesiaMachineGraph

SELiquidCompartmentGraph *	m_AerosolGraph

SELiquidCompartmentGraph *	m_CombinedAerosolInhalerGraph

std::vector< SELiquidCompartment * >	m_AerosolCompartments

std::vector< SELiquidCompartment * >	m_AerosolLeafCompartments

std::vector< SELiquidCompartment * >	m_ChymeCompartments

std::vector< SELiquidCompartment * >	m_ChymeLeafCompartments

std::vector< SEGasCompartment * >	m_PulmonaryCompartments

std::vector< SEGasCompartment * >	m_PulmonaryLeafCompartments

std::vector< SEThermalCompartment * >	m_TemperatureCompartments

std::vector< SEThermalCompartment * >	m_TemperatureLeafCompartments

std::vector< SETissueCompartment * >	m_TissueCompartments

std::vector< SETissueCompartment * >	m_TissueLeafCompartments

std::vector< SELiquidCompartment * >	m_UrineCompartments

std::vector< SELiquidCompartment * >	m_UrineLeafCompartments

std::vector< SELiquidCompartment * >	m_VascularCompartments

std::vector< SELiquidCompartment * >	m_VascularLeafCompartments

std::vector< SEGasCompartment * >	m_AnesthesiaMachineCompartments

std::vector< SEGasCompartment * >	m_AnesthesiaMachineLeafCompartments

std::vector< SEGasCompartment * >	m_InhalerCompartments

std::vector< SEGasCompartment * >	m_InhalerLeafCompartments

std::vector< SELiquidCompartment * >	m_InhalerAerosolCompartments

std::vector< SELiquidCompartment * >	m_InhalerAerosolLeafCompartments

std::vector< SEGasCompartment * >	m_MechanicalVentilatorCompartments

std::vector< SEGasCompartment * >	m_MechanicalVentilatorLeafCompartments

std::map< SETissueCompartment , SELiquidCompartment >	m_ExtracellularFluid

std::map< SETissueCompartment , SELiquidCompartment >	m_IntracellularFluid

Protected Attributes inherited from biogears::SECompartmentManager
std::vector< SEGasCompartment * >	m_GasCompartments

std::vector< SEGasCompartment * >	m_GasLeafCompartments

std::map< std::string, SEGasCompartment * >	m_GasName2Compartments

std::vector< SEGasCompartmentLink * >	m_GasLinks

std::map< std::string, SEGasCompartmentLink * >	m_GasName2Links

std::vector< SEGasCompartmentGraph * >	m_GasGraphs

std::map< std::string, SEGasCompartmentGraph * >	m_GasName2Graphs

std::vector< SESubstance * >	m_GasSubstances

std::vector< SELiquidCompartment * >	m_LiquidCompartments

std::vector< SELiquidCompartment * >	m_LiquidLeafCompartments

std::map< std::string, SELiquidCompartment * >	m_LiquidName2Compartments

std::vector< SELiquidCompartmentLink * >	m_LiquidLinks

std::map< std::string, SELiquidCompartmentLink * >	m_LiquidName2Links

std::vector< SELiquidCompartmentGraph * >	m_LiquidGraphs

std::map< std::string, SELiquidCompartmentGraph * >	m_LiquidName2Graphs

std::vector< SESubstance * >	m_LiquidSubstances

std::vector< SEThermalCompartment * >	m_ThermalCompartments

std::vector< SEThermalCompartment * >	m_ThermalLeafCompartments

std::map< std::string, SEThermalCompartment * >	m_ThermalName2Compartments

std::vector< SEThermalCompartmentLink * >	m_ThermalLinks

std::map< std::string, SEThermalCompartmentLink * >	m_ThermalName2Links

std::vector< SETissueCompartment * >	m_TissueCompartments

std::vector< SETissueCompartment * >	m_TissueLeafCompartments

std::map< std::string, SETissueCompartment * >	m_TissueName2Compartments

SESubstance *	m_O2

SESubstance *	m_CO2

SESubstance *	m_CO

SESubstance *	m_Hb

SESubstance *	m_HbO2

SESubstance *	m_HbCO2

SESubstance *	m_HbO2CO2

SESubstance *	m_HbCO

SESubstanceManager &	m_subMgr

Protected Attributes inherited from biogears::Loggable
Logger *	m_Logger

Friends
class	BioGearsSubstances

Additional Inherited Members
Static Public Attributes inherited from biogears::Loggable
static const std::string	empty

static const char *	empty_cStr

Detailed Description

Manages all compartments and graphs associated with all BioGears systems/equipement.

Constructor & Destructor Documentation

biogears::BioGearsCompartments::BioGearsCompartments ( BioGears & data )

biogears::BioGearsCompartments::~BioGearsCompartments ( )

virtual

Member Function Documentation

void biogears::BioGearsCompartments::AddGasCompartmentSubstance ( SESubstance & sub )

protectedvirtual

Reimplemented from biogears::SECompartmentManager.

void biogears::BioGearsCompartments::AddLiquidCompartmentSubstance ( SESubstance & sub )

protectedvirtual

Reimplemented from biogears::SECompartmentManager.

bool biogears::BioGearsCompartments::AllowGasSubstance	(	SESubstance &	s,
		SEGasCompartment &	cmpt
	)		const

protectedvirtual

Reimplemented from biogears::SECompartmentManager.

bool biogears::BioGearsCompartments::AllowLiquidSubstance	(	SESubstance &	s,
		SELiquidCompartment &	cmpt
	)		const

protectedvirtual

Reimplemented from biogears::SECompartmentManager.

void biogears::BioGearsCompartments::Clear ( )

virtual

Reimplemented from biogears::SECompartmentManager.

SELiquidCompartmentGraph & biogears::BioGearsCompartments::GetActiveAerosolGraph ( )

SELiquidCompartmentGraph & biogears::BioGearsCompartments::GetActiveCardiovascularGraph ( )

SEGasCompartmentGraph & biogears::BioGearsCompartments::GetActiveRespiratoryGraph ( )

SELiquidCompartmentGraph & biogears::BioGearsCompartments::GetAerosolAndInhalerGraph ( )

const std::vector<SELiquidCompartment*>& biogears::BioGearsCompartments::GetAerosolCompartments ( )

inline

SELiquidCompartmentGraph & biogears::BioGearsCompartments::GetAerosolGraph ( )

const std::vector<SELiquidCompartment*>& biogears::BioGearsCompartments::GetAerosolLeafCompartments ( )

inline

const std::vector<SEGasCompartment*>& biogears::BioGearsCompartments::GetAnesthesiaMachineCompartments ( )

inline

SEGasCompartmentGraph & biogears::BioGearsCompartments::GetAnesthesiaMachineGraph ( )

const std::vector<SEGasCompartment*>& biogears::BioGearsCompartments::GetAnesthesiaMachineLeafCompartments ( )

inline

SELiquidCompartmentGraph & biogears::BioGearsCompartments::GetCardiovascularGraph ( )

SELiquidCompartmentGraph & biogears::BioGearsCompartments::GetCerebralGraph ( )

const std::vector<SELiquidCompartment*>& biogears::BioGearsCompartments::GetChymeCompartments ( )

inline

const std::vector<SELiquidCompartment*>& biogears::BioGearsCompartments::GetChymeLeafCompartments ( )

inline

SELiquidCompartment& biogears::BioGearsCompartments::GetExtracellularFluid ( SETissueCompartment & t )

inline

const std::map<SETissueCompartment*, SELiquidCompartment*>& biogears::BioGearsCompartments::GetExtracellularFluid ( )

inline

const std::vector<SELiquidCompartment*>& biogears::BioGearsCompartments::GetInhalerAerosolCompartments ( )

inline

const std::vector<SELiquidCompartment*>& biogears::BioGearsCompartments::GetInhalerAerosolLeafCompartments ( )

inline

const std::vector<SEGasCompartment*>& biogears::BioGearsCompartments::GetInhalerCompartments ( )

inline

const std::vector<SEGasCompartment*>& biogears::BioGearsCompartments::GetInhalerLeafCompartments ( )

inline

SELiquidCompartment& biogears::BioGearsCompartments::GetIntracellularFluid ( SETissueCompartment & t )

inline

const std::map<SETissueCompartment*, SELiquidCompartment*>& biogears::BioGearsCompartments::GetIntracellularFluid ( )

inline

const std::vector<SEGasCompartment*>& biogears::BioGearsCompartments::GetMechanicalVentilatorCompartments ( )

inline

const std::vector<SEGasCompartment*>& biogears::BioGearsCompartments::GetMechanicalVentilatorLeafCompartments ( )

inline

const std::vector<SEGasCompartment*>& biogears::BioGearsCompartments::GetPulmonaryCompartments ( )

inline

const std::vector<SEGasCompartment*>& biogears::BioGearsCompartments::GetPulmonaryLeafCompartments ( )

inline

SELiquidCompartmentGraph & biogears::BioGearsCompartments::GetRenalGraph ( )

SEGasCompartmentGraph & biogears::BioGearsCompartments::GetRespiratoryAndAnesthesiaMachineGraph ( )

SEGasCompartmentGraph & biogears::BioGearsCompartments::GetRespiratoryAndInhalerGraph ( )

SEGasCompartmentGraph & biogears::BioGearsCompartments::GetRespiratoryAndMechanicalVentilatorGraph ( )

SEGasCompartmentGraph & biogears::BioGearsCompartments::GetRespiratoryGraph ( )

const std::vector<SEThermalCompartment*>& biogears::BioGearsCompartments::GetTemperatureCompartments ( )

inline

const std::vector<SEThermalCompartment*>& biogears::BioGearsCompartments::GetTemperatureLeafCompartments ( )

inline

const std::vector<SETissueCompartment*>& biogears::BioGearsCompartments::GetTissueCompartments ( )

inlinevirtual

Reimplemented from biogears::SECompartmentManager.

const std::vector<SETissueCompartment*>& biogears::BioGearsCompartments::GetTissueLeafCompartments ( )

inlinevirtual

Reimplemented from biogears::SECompartmentManager.

const std::vector<SELiquidCompartment*>& biogears::BioGearsCompartments::GetUrineCompartments ( )

inline

const std::vector<SELiquidCompartment*>& biogears::BioGearsCompartments::GetUrineLeafCompartments ( )

inline

const std::vector<SELiquidCompartment*>& biogears::BioGearsCompartments::GetVascularCompartments ( )

inline

const std::vector<SELiquidCompartment*>& biogears::BioGearsCompartments::GetVascularLeafCompartments ( )

inline

bool biogears::BioGearsCompartments::Load	(	const CDM::CompartmentManagerData &	in,
		SECircuitManager *	circuits = `nullptr`
	)

virtual

Reimplemented from biogears::SECompartmentManager.

auto biogears::BioGearsCompartments::make_unique ( BioGears & bg ) -> std::unique_ptr<BioGearsCompartments>

static

void biogears::BioGearsCompartments::StateChange ( )

virtual

Reimplemented from biogears::SECompartmentManager.

void biogears::BioGearsCompartments::UpdateAirwayGraph ( )

inline

Friends And Related Function Documentation

friend class BioGearsSubstances

friend

Member Data Documentation

std::vector<SELiquidCompartment*> biogears::BioGearsCompartments::m_AerosolCompartments

protected

SELiquidCompartmentGraph* biogears::BioGearsCompartments::m_AerosolGraph

protected

std::vector<SELiquidCompartment*> biogears::BioGearsCompartments::m_AerosolLeafCompartments

protected

std::vector<SEGasCompartment*> biogears::BioGearsCompartments::m_AnesthesiaMachineCompartments

protected

SEGasCompartmentGraph* biogears::BioGearsCompartments::m_AnesthesiaMachineGraph

protected

std::vector<SEGasCompartment*> biogears::BioGearsCompartments::m_AnesthesiaMachineLeafCompartments

protected

SELiquidCompartmentGraph* biogears::BioGearsCompartments::m_CardiovascularGraph

protected

SELiquidCompartmentGraph* biogears::BioGearsCompartments::m_CerebralGraph

protected

std::vector<SELiquidCompartment*> biogears::BioGearsCompartments::m_ChymeCompartments

protected

std::vector<SELiquidCompartment*> biogears::BioGearsCompartments::m_ChymeLeafCompartments

protected

SELiquidCompartmentGraph* biogears::BioGearsCompartments::m_CombinedAerosolInhalerGraph

protected

SELiquidCompartmentGraph* biogears::BioGearsCompartments::m_CombinedCardiovascularGraph

protected

SEGasCompartmentGraph* biogears::BioGearsCompartments::m_CombinedRespiratoryAnesthesiaGraph

protected

SEGasCompartmentGraph* biogears::BioGearsCompartments::m_CombinedRespiratoryInhalerGraph

protected

SEGasCompartmentGraph* biogears::BioGearsCompartments::m_CombinedRespiratoryMechanicalVentilatorGraph

protected

BioGears& biogears::BioGearsCompartments::m_data

protected

std::map<SETissueCompartment*, SELiquidCompartment*> biogears::BioGearsCompartments::m_ExtracellularFluid

protected

std::vector<SELiquidCompartment*> biogears::BioGearsCompartments::m_InhalerAerosolCompartments

protected

std::vector<SELiquidCompartment*> biogears::BioGearsCompartments::m_InhalerAerosolLeafCompartments

protected

std::vector<SEGasCompartment*> biogears::BioGearsCompartments::m_InhalerCompartments

protected

std::vector<SEGasCompartment*> biogears::BioGearsCompartments::m_InhalerLeafCompartments

protected

std::map<SETissueCompartment*, SELiquidCompartment*> biogears::BioGearsCompartments::m_IntracellularFluid

protected

std::vector<SEGasCompartment*> biogears::BioGearsCompartments::m_MechanicalVentilatorCompartments

protected

std::vector<SEGasCompartment*> biogears::BioGearsCompartments::m_MechanicalVentilatorLeafCompartments

protected

std::vector<SEGasCompartment*> biogears::BioGearsCompartments::m_PulmonaryCompartments

protected

std::vector<SEGasCompartment*> biogears::BioGearsCompartments::m_PulmonaryLeafCompartments

protected

SELiquidCompartmentGraph* biogears::BioGearsCompartments::m_RenalGraph

protected

SEGasCompartmentGraph* biogears::BioGearsCompartments::m_RespiratoryGraph

protected

std::vector<SEThermalCompartment*> biogears::BioGearsCompartments::m_TemperatureCompartments

protected

std::vector<SEThermalCompartment*> biogears::BioGearsCompartments::m_TemperatureLeafCompartments

protected

std::vector<SETissueCompartment*> biogears::BioGearsCompartments::m_TissueCompartments

protected

std::vector<SETissueCompartment*> biogears::BioGearsCompartments::m_TissueLeafCompartments

protected

bool biogears::BioGearsCompartments::m_UpdateActiveAerosolGraph

protected

bool biogears::BioGearsCompartments::m_UpdateActiveAirwayGraph

protected

std::vector<SELiquidCompartment*> biogears::BioGearsCompartments::m_UrineCompartments

protected

std::vector<SELiquidCompartment*> biogears::BioGearsCompartments::m_UrineLeafCompartments

protected

std::vector<SELiquidCompartment*> biogears::BioGearsCompartments::m_VascularCompartments

protected

std::vector<SELiquidCompartment*> biogears::BioGearsCompartments::m_VascularLeafCompartments

protected

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Friends

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Friends And Related Function Documentation

Member Data Documentation